Schizosaccharomyces osmophilus (fission yeast): SOMG_04294
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Entry
SOMG_04294 CDS
T09274
Symbol
utp21
Name
(RefSeq) U3 snoRNP-associated protein Utp21
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SOMG_04294 (utp21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
som03009
]
SOMG_04294 (utp21)
Ribosome biogenesis [BR:
som03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SOMG_04294 (utp21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
WDR55
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_Nup120_160
Beta-prop_NWD2_C
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_HPS5
eIF2A
Beta-prop_IFT140_2nd
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
WD40_RFWD3
Cytochrom_D1
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_LRRK2
Nucleoporin_N
ELYS-bb
Beta-prop_SCAP
WDR90_beta-prop_4th
Ge1_WD40
Beta-prop_RIG_1st
ALS_ss_C
Motif
Other DBs
NCBI-GeneID:
80877770
NCBI-ProteinID:
XP_056039669
UniProt:
A0AAE9WJC3
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All DBs
Position
3:join(523496..523571,523622..525919,525974..526314)
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AA seq
904 aa
AA seq
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MPFTEKKRKTQDINVKPLRKSRIFAPFRSIGYVSNHIPFDIEVRGTHFLVSTCVGNSFQT
YDCERLNLLFVGKQLEREISCLKSYKDFMLAGSGSKLFAYKRGKIVWEIDLESSAGEIVQ
LDAFGEWIIATSSTRHVHVWKHVSKYELPELHTVFQPTANADVTAMIHPSTYLNKVLFGF
SDGSFQLWNMKTTKCVYKFNDLAGNAITSLAQAPVVDVLAIGTASGQILLYNIRNATIIM
EFRQSGRVLSSSFRTDGVPVLATSNHQGDISFFDLSKRRVQNVVYGAHHGSIPKLQFLNG
QPLLVTAGPDNSLKEWIFDSMDGAPRVLRLRNGHYEPPSYIQFYGQSVHFLLSAATDNTL
RAISLFQDNQTVELSQGSVTSKAKKLNVRPDELKLPEIISMSSSNTREKYWDNILTAHKN
HNAARTWSWKNKTLGQHVLPTTDGTPVRAVCVSCCGNFGMVGSSKGLVNVYNMQSGILRK
SFGHEQQSGKPVTSIMVDNVNRVLVASSLDGNLRFWDFNKGSLINTIDMGSSITNAIYHH
ASDLIAVICDDFGIRIVDVQTKKIVRELWGHSNRLTDVDFSNDGRWLVTASLDGTIRTWD
LPTGHLIDAITTGSVCTGLSFGPTGDYLATSHVDQIGISLWTNLSMFKHVSTKSLRLDDI
TEVSLPSISGEKGTSLVQAALNAEEDEEEDDDILYTTADQIDGQLQTLSKLPRTQWQTLV
SMELIKARNAPKEAPKAPEKAPFFLPSLKEQSEGLVSKLDETNNDERNRPKLASSMQTVT
TRFSELLHAADDDVFFEYLKTLPPAKTDLEIRSLEAYPPYEEFILFINSMTSRLASRRDF
ELVQAYMAVFIKAHEDVLLSSDALEEKENVLNALKTWDAVQKEENNRLLDLVHYCSGVLS
FMRT
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttactgagaagaagagaaaaactcaagatattaacgtgaaaccattgaggaaa
tcgaggatttttgcgccttttcgatccattggctatgtttcaaaccacataccttttgac
attgaagttcgtggtactcactttctagtttcaacatgcgttggaaattcttttcaaact
tacgattgtgaacgactcaatcttttgtttgtcggtaaacagctggaacgagagatttct
tgtctaaaatcatacaaggattttatgctggctgggtctggctctaagctttttgcttat
aagcgaggcaaaattgtctgggaaatagatttggaatcgtcagctggtgagattgtgcaa
ttggatgcttttggtgaatggatcattgcgactagcagtacacgccatgttcatgtttgg
aaacatgtttccaaatacgaactgccagagttacatacggtttttcaacctacggccaat
gcggacgtaactgcaatgattcatcctagcacgtacttgaataaagttctatttggattt
tctgatggctccttccaattatggaatatgaaaacgacaaagtgtgtttacaaattcaat
gatttggctggcaatgccattacctctcttgctcaggctcctgtagttgacgtccttgcc
atcggtactgcaagtggtcaaattttgctgtataatataagaaatgccaccattataatg
gaatttcgtcaaagtggccgtgtcctctcctcttccttccgaacggacggtgtaccggtt
ttggcgacatcgaatcatcagggagacatttccttcttcgatttatcaaaacgtcgtgtc
caaaatgttgtctatggagctcatcatggttctattcccaaacttcaattcttaaatggt
cagcctttgttggttactgccggtcctgacaactctctcaaggaatggatctttgactcc
atggatggtgctcccagagtcttgcgtctccgcaatggccattatgagcctccctcttac
atccaattttatggccaaagcgtccatttcctcctttccgctgccactgataatacgcta
cgtgctatcagccttttccaagataatcaaaccgttgagctatcccagggctccgttacc
tcgaaagcgaaaaaattgaatgttcgtccggatgaattaaagcttcccgaaataatttcc
atgtcttcttctaatacccgcgaaaaatactgggataacatccttactgctcataagaat
cataatgctgctcgtacctggagctggaaaaacaagactttaggtcagcatgttctacca
acgacggatggtacccctgttcgcgccgtttgtgttagttgctgtggtaatttcggtatg
gtgggtagttccaagggccttgtaaacgtttataacatgcaaagtggtattttgagaaaa
tcttttggtcacgaacagcagagcggcaagcctgtaacatctattatggttgacaacgtc
aatcgagttttggttgcatcctctttggatggtaatttgcgtttctgggatttcaataaa
gggtctctgatcaatactattgatatgggcagttctatcacgaatgctatttaccatcat
gcgtccgatctcatagctgttatctgcgatgactttggcattcgcatcgtcgatgttcaa
acaaaaaaaatcgttcgtgaattatggggccactcgaatcgtttgactgacgtcgatttc
tccaacgatggacgctggttagttacagcatctttagatggaactattcgtacttgggac
ttgccaacaggccacttgattgatgcaattactaccggtagtgtatgtactggcttgtct
tttggacctaccggtgattatttggcaacgtctcacgttgatcagattggaatcagttta
tggaccaatctttcaatgtttaagcatgtgtctacgaaatcgctacgattggatgatatc
actgaggtttctcttccatcaatttccggcgagaagggaacgtcgctggtacaagctgcc
ttgaatgctgaagaagatgaggaagaggatgatgatattttatacaccacagctgatcaa
attgacggtcagttacagactctcagtaaacttcctcgaacacaatggcagactcttgtg
agcatggagttgattaaagctcgtaatgctcctaaagaggcacctaaggcacctgagaag
gcgccgttctttttgccgtctctgaaagaacaatcagaggggcttgtttcaaagcttgat
gaaacaaataatgacgagcgaaaccgaccaaaattggcttcctcaatgcaaaccgttaca
accagattttccgaactcttgcatgctgcagatgatgatgtattctttgaatatttaaag
actctgccaccagctaagaccgatttagaaatccgctctctggaggcatacccaccttac
gaagaattcattttatttatcaatagcatgacttcccggttagcaagccgtcgggacttt
gagctggtacaggcttatatggcagttttcattaaagcacatgaagatgttttgttgtct
tcagatgctttggaagaaaaagaaaacgttttgaatgcattgaaaacttgggatgctgtg
caaaaggaagaaaacaatcgattgctagatttggttcattattgctctggtgtcttgagt
tttatgcggacttag
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