Schizosaccharomyces osmophilus (fission yeast): SOMG_04307
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Entry
SOMG_04307 CDS
T09274
Symbol
rrp5
Name
(RefSeq) U3 snoRNP-associated protein Rrp5
KO
K14792
rRNA biogenesis protein RRP5
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
som03009
]
SOMG_04307 (rrp5)
Ribosome biogenesis [BR:
som03009
]
Eukaryotic type
90S particles
Other 90S particles
SOMG_04307 (rrp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
Spt6_S1
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_19
TPR_16
TPR_6
Motif
Other DBs
NCBI-GeneID:
80877783
NCBI-ProteinID:
XP_056039021
UniProt:
A0AAF0AYN3
LinkDB
All DBs
Position
3:553217..558289
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AA seq
1690 aa
AA seq
DB search
MAGNKRRRDTVSNGSDKPDNDKSSQQNGTTSSLSAVESSGDFPRGGGSTLTPLEYKEAVT
EAKREALTGTDEAEVTKASSKPSKKKKKNTTKATSSNEDELSSVSIESLKYKSLIPGTLI
LGQVSQINTLDIAVSLPNGLSGYVPITSISEKLSQRLENLDDAATGTDSEAVDHLDEFNN
FPDLIDLYHVGQWIRVCVTKLGTDDTKNNKKHVELSMRPQDVNGPTEEPNNYTSGSVIQA
AVSSVEDHGIVFDVGLKNFNGFLSKKNIGDYKFVEGQSLVCTVLSKDQRTLHLALSTPDS
PPLDGLPSVQAILPGNYINVLITDLKDNGVVGKYMGVADVTSDLFHCSVNQTKDLEKQFH
LAKSSPARVLFVLPGDPPKIAVSFLPHILSFNFDSAKPQKLDQLDVGFIVNTAKVTHVSP
SLGVFCDVGIPGIYGFTHISRLSDKKVANVSSNNGPYKVNSVHRARVTGYSYVDNLFILS
FQNSVLEQPFLRIEDINVGQYVEGSVLKLIPQGIVVTIADGINALVPSSHMSDIALQFPE
RRFKVGTTVKGRVLTTNVLRRRVILTLKKSLLNSDLPPICSFEQATPGIRAIGVLARVLE
DGAIVEFYNSVRGFLPVSEMSEAYIRDAREHFKIGQTVSVTILSCEPSERKMRVSCREQN
WDEKRLEQFDSISLGSLVSGSVLQKTENSVIVDLGNKVSGVIALGHLSDGDLTKSTKVLN
KLRVSTKITDVLVLRKGQDKRNITLSLKKSLINAAKEERFPKTIQEVKEGVKYAGFVRNT
TDFGVFVEFCDGLVALVPKAYLSEDYVPVPGALFKPQQSVECVCLSVNLQQKKIFMSFKP
LSSNKQRVTEVLDSKYDIEKPVDESIKKTYDYTAGKVTWGTITSVKASQLNVELAANVQG
RVEVSEVFDKAEDIESLNKPLKNFKKGDKICVRVLGIHDSRHHKFLPISHRVSPKQFLEL
SVRPSVMSMEPFKLETPTFKKGDSVIAYVNNISQECVWVSVTSTINGRIMAMDLGYDAEV
INSIPKHFFGGKALKCTVIDTSKVLGLSLIKPVDGYESVKPGDKFSGRVMNVNESGAIVH
LPGHLTGRVSRLDMSDDYDIAPNEKFVRNKYISVYVMSVDVSNKKIALSTRESRVNPQNA
EVKDREIKSIDDLKPGDVCRGFVSNVADQGLFVSLGHDLVARIKIAELFDTFIKEWKTQF
QVNMLVRGKIISVDHDTKRIEMTLKPSKIDESSSITTAFSDLQVGSNIDGTVAKVEDYGL
LIKIDSTDGIVGLCHKSEVADAVVNDISRLYSVGDKVRAHVLDVNPEKRRISLGLKSSYF
DADSDVDLSDEIEMKSADESSDEEMAEDQQSESEADEESSSEEENEKPAPLNVNGFDWGD
SSTVFDKPARDVSESESEDDETPKRKKSKPDNFNDEERDLDEAPHVPADFERQLLSSPNS
SFLWISYMAYQLNLNEIEKAREIGQRALNTINYREEEEKLNVWMALLNLEIAYGTTESLQ
NTFKDACAHCEPLVVYEKLCGVLIKSNKLDLANEYMEGMLKNFKQVPSVWTQYASFLLTN
GSEDTARGLLQRSLQSLPKSEHVKIIEKFAILEFKQGDPERGRTIFEGLLSNYPKRLDLW
NVLIDMEVKQGDTAIIRRLFERVLASKLSTKKAKFIFKKWLTYEKEIGDNKGVDSVKQKA
LEYVSGNRED
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaataagagaaggagggacaccgtttcgaatggctccgataagccagacaat
gataagtcgtctcaacaaaatggaactacttcgtctctttctgctgtggaatcttcagga
gatttccctcgtggaggaggttccacattgacgcctcttgaatataaagaggctgtaacg
gaggctaaacgagaagcccttacgggtaccgatgaagctgaagttactaaggcttcaagc
aagccatccaagaagaaaaagaagaacactacgaaggctacttcttctaacgaagatgaa
ctatcttccgtgtccatcgaaagcttaaaatataaaagtttgataccaggaactttgatt
ttgggacaagtctctcaaattaataccttagatattgctgtttccttgcctaatggtctc
agcggatatgtgcccatcaccagtatatctgaaaagctttctcagcgtcttgaaaatctg
gacgatgctgccaccggtaccgacagtgaagccgttgatcatcttgacgaatttaataac
ttccctgatttaattgatctttatcacgttggacaatggattcgtgtatgcgtgaccaaa
cttggtaccgatgatacaaaaaataacaaaaagcacgttgaactgagtatgcgccctcaa
gatgtaaatggccccacagaagaaccaaataattatactagtgggtcggtgattcaagcg
gctgtttccagtgtggaagatcacggtattgtttttgatgtgggattgaaaaactttaat
ggctttctgtctaaaaaaaatattggagattataaattcgtagaaggccagagtttggtt
tgtactgttttatcaaaagatcaacgtactcttcacttagctctttccacccctgattca
cctcctttagatggtttaccttctgttcaagctattcttccgggtaactacatcaatgta
ttaataacagatcttaaagataatggtgtcgttggaaagtatatgggcgtggctgatgta
acgagcgatttgttccattgttccgttaatcaaacaaaggatttggaaaaacagtttcac
cttgccaagtcctcgccagctcgtgtgcttttcgtcctcccaggcgatcctccaaagatt
gctgtttctttcttacctcatattttgagtttcaattttgattcggcgaaacctcaaaaa
cttgaccagcttgatgttggattcatcgtcaatactgctaaagttacacacgttagtcct
tctctcggtgttttttgcgatgtaggcatccccggtatctatggtttcactcacatttct
cgtttgtctgataaaaaggtagcaaatgttagctcaaataatggcccttataaagtaaat
agtgtccaccgtgctcgtgtaactggttatagttacgtcgacaacttgttcatcttatcc
ttccagaattccgttttagagcaaccctttttacgtattgaggatataaacgttggtcaa
tatgtggagggctctgtactgaaactaattccacaaggtatcgtcgtcactatcgcagat
ggaatcaatgccttggtaccgtcttctcatatgtcagatattgctttgcaattccctgag
cgacgttttaaagtcggcactactgtcaagggtcgtgtgttaaccacgaatgttttgaga
agaagagttattctcacattgaagaaatcactgttaaacagcgacctacctccaatttgc
tcgtttgaacaagcaacaccaggtattcgtgctataggtgttcttgctcgtgtgttagaa
gatggtgcgattgtagagttttacaacagcgttcgtggattcttgcctgtgtctgaaatg
agtgaagcttatattcgggatgcgagggaacattttaagattggtcaaactgtttctgtg
actattcttagttgtgaaccatccgaacgtaaaatgagagttagttgtcgtgaacaaaat
tgggacgaaaaaagacttgaacaatttgatagtatttccttgggttctcttgtttccggt
tccgtgttacaaaaaaccgaaaattctgttatcgttgatttgggtaataaagtttcggga
gttattgctttaggtcatttgtccgatggtgaccttactaagtctaccaaggttttgaac
aaacttcgtgtttctacgaaaataacagatgtactagttcttcgaaaaggccaagacaag
agaaatataactctgtcattaaagaagagccttataaatgctgctaaagaagaacgcttc
cccaaaactatacaagaggtaaaagagggtgtcaagtatgctggctttgttcgcaatacc
actgattttggtgtttttgtcgaattttgtgatggcttggtagcgttggtacctaaagct
tatctgtcagaagactatgttcctgtgccaggcgccttatttaagcctcaacagtctgtt
gaatgtgtttgcctttctgtaaatcttcaacaaaagaaaatatttatgtcatttaaacct
ttatcttctaataaacaaagagttactgaagttttggatagcaaatatgacattgaaaaa
cctgttgacgaatctattaagaaaacttatgattatacagctggaaaggtcacatggggt
actataacttctgtcaaagcgtctcagcttaatgtcgaattggccgcaaatgtacagggt
cgcgttgaagtttctgaagtatttgacaaggctgaagatattgaaagccttaataagcct
ctcaaaaatttcaagaaaggtgataaaatttgtgtccgtgttttaggtatacacgactcc
aggcatcataagttcttacctatctctcatcgtgtttctcctaagcaatttttggagttg
agtgtgcgcccttctgtcatgagtatggaaccctttaagcttgagactcctactttcaag
aagggagactcggtcattgcttatgtcaataacatatctcaggaatgcgtatgggtttcc
gttacttcaacaataaatggaaggattatggctatggacttgggttatgatgcagaagtg
attaatagtataccaaagcacttttttggtggtaaagctttgaaatgtacagtaattgac
acttcaaaagttctcggtctttcccttatcaaacccgttgacggttatgagtccgttaaa
ccaggtgataagttttcaggaagagtgatgaatgtaaatgagagcggagcaatcgttcat
cttcctggccatttaactggacgagtttctcgtttggacatgtcagatgattatgatatt
gctccaaatgaaaagtttgttcgtaacaaatacatatcggtatatgttatgagcgttgat
gtttcgaataagaaaattgccctttccactcgtgaatctagagtaaatccacaaaatgct
gaggtcaaagatagagagattaaatccatcgatgatttgaagcctggtgatgtctgtcgt
gggtttgtttccaacgtggctgaccaaggtctttttgtttcgttaggtcacgatttggtt
gctagaataaagattgctgagcttttcgatactttcatcaaagagtggaagacacaattc
caagttaacatgctggtgagaggaaaaataattagcgttgatcatgataccaagcgtatt
gaaatgacgctaaaacccagtaaaatagatgagtcttcttcgattaccactgcattttct
gatttacaggttggaagtaacattgatggtaccgttgctaaagttgaggattatggtctt
cttatcaaaattgacagcacagacggcattgttggtttgtgtcataaatctgaagttgca
gacgctgtcgtcaatgatataagcaggttatatagcgttggtgataaagttcgtgctcac
gttttagatgtaaatcctgaaaaacgacgtatatcgttgggccttaaatcatcttacttt
gatgctgattcagatgttgatttatcagatgaaattgaaatgaagtctgctgatgaaagt
tcagatgaagaaatggcagaagatcaacaatccgaatcagaggctgacgaagaatcatca
tctgaagaggaaaatgagaaacctgctccattgaatgttaatggtttcgattggggcgac
agctctaccgtattcgacaaacctgctcgtgatgtgtctgaaagtgagagtgaagatgat
gaaactcccaaacgcaagaagtcgaagcctgacaattttaatgacgaagagcgtgactta
gatgaagctccacatgtgcctgctgactttgagcgtcaattgctatcatcacccaattct
tcctttttgtggatcagttatatggcttaccaattgaatcttaacgagattgagaaagct
cgtgaaattggtcaacgtgccttgaataccatcaattacagggaagaagaagaaaaattg
aacgtttggatggcattacttaatttggaaattgcctatggaacaactgaatctcttcaa
aacactttcaaggatgcttgtgctcactgtgaacctttggttgtttatgaaaagttgtgt
ggtgtcttgataaaaagcaacaagttggatttggctaatgagtatatggaaggtatgctt
aaaaacttcaagcaagttccttccgtgtggactcaatatgcttctttcctcttaacaaat
ggaagcgaagatacggcaagaggtttactgcagcgtagtttgcaaagcttgcctaaatct
gaacatgtaaagataattgaaaagttcgctatccttgaatttaaacagggtgatcctgag
cgtggtcgcaccatttttgaaggattgttgagcaactatccaaaacgcttggacttgtgg
aatgtcttgattgacatggaagtcaagcaaggtgacactgctatcattcgtcgcctgttt
gagcgtgtgctcgcgtccaagctttctaccaagaaagctaagtttatttttaagaaatgg
ttgacttatgaaaaggaaattggcgacaacaagggagttgactcagttaaacaaaaagcc
ttagagtatgtatctggaaatcgggaggattaa
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