Schizosaccharomyces osmophilus (fission yeast): SOMG_04345
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Entry
SOMG_04345 CDS
T09274
Symbol
taf6
Name
(RefSeq) SAGA complex/transcription factor TFIID complex histone H4-like subunit Taf6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SOMG_04345 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
som03021
]
SOMG_04345 (taf6)
03036 Chromosome and associated proteins [BR:
som03036
]
SOMG_04345 (taf6)
Transcription machinery [BR:
som03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
SOMG_04345 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
SOMG_04345 (taf6)
Chromosome and associated proteins [BR:
som03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
SOMG_04345 (taf6)
STAGA complex
SOMG_04345 (taf6)
TFTC complex
SOMG_04345 (taf6)
SAGA complex
SOMG_04345 (taf6)
SLIK complex
SOMG_04345 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
TYW2_N_arc
BDI_1685-like_C
Motif
Other DBs
NCBI-GeneID:
80877821
NCBI-ProteinID:
XP_056039705
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All DBs
Position
3:complement(join(637748..638989,639128..639259))
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AA seq
457 aa
AA seq
DB search
MSLTVWNVESIKDVAEMLGISSLGDEAASAIAMDLEYRIHQVIQEAMKFMVHSKRTVLSN
ADISSALRTLNVEPLYGFNTSRPVEFHEAAVGGGQNSLYYLDDEEIDFEKIINYPLPKVP
RNISYTAHWLAIEGVQPAIPQNPTPSDHTTGEWAPKGPAAVTPGATAATKEASNGISSME
NVEVKPLVRHVLSKELQLYFERITAALLDVSNSELRHAALSSLRDDPGLHQLLPYFIMFL
SDSISHNLNNLVILTTLMQMAWALLDNPNLFVEPYVQQLMPSILTCLVAKRLGNDPHNHD
HYALRDLAAYLLGIVCNRFGNVYYTLKPRVTRTVLKAFLDNTKPYTTHYGAIIGLKTMGK
EAIRVLLVPNIKVYEILVIKSFEKGNDDDKYEANRCMDALYDSLLLLRDDQLSTDKTVPP
NARGLLEKIVGNLMTEKIMEKGDKDLILALVDENNPA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgacagtatggaacgtagaatccataaaagatgtcgctgaaatgcttggtata
agcagtctgggtgatgaggcagcatctgcaattgcaatggatcttgaatatcgaatccac
caagtcatacaggaagcaatgaagtttatggtccattcaaaacggacggtgctttcaaat
gctgacatatcgtctgctctgagaaccttaaacgttgaaccactttacgggtttaataca
tctcggcctgttgaatttcatgaagccgccgtaggtggtgggcaaaactctctttattat
cttgatgatgaagaaattgatttcgagaaaattatcaactatcctttaccaaaggtaccc
agaaatatttcttatactgcccattggttagccattgagggtgttcaacctgctattcca
caaaacccaaccccctccgaccatacaactggagaatgggctcctaagggtccagctgca
gttactcccggtgctactgctgctacaaaagaggcatctaatggtatttcatctatggag
aatgttgaagtaaaaccgttagtccgtcacgtgctttcgaaagagcttcaactttatttc
gagcgtattactgctgctttgcttgatgtatcaaattcagaacttcggcatgccgcatta
tcaagccttcgagatgatccaggcttacatcaactcttgccctactttattatgtttctt
tctgattccatttctcataatctaaataatttagttattcttactacgctcatgcaaatg
gcttgggcgcttcttgacaatcccaatttatttgttgagccttatgttcaacagctaatg
ccctctatcttaacttgtctggttgccaaacgtcttgggaatgatcctcacaatcacgac
cattatgctttaagagacttagctgcttacctcttaggaattgtttgtaatcgatttggc
aatgtttactatacattgaaaccgagagttactaggacagtgttgaaggctttcttagat
aatacaaagccttatacaactcattacggagctataattggtctcaaaacaatgggaaaa
gaagctattcgggtgcttcttgttcctaatattaaggtctatgaaattttggtcattaag
agttttgaaaagggcaacgacgatgacaaatatgaagcgaatcgttgtatggatgctttg
tatgattcattattgcttttaagagatgatcaactctctacagataaaaccgtcccccct
aatgctcggggtcttttggaaaaaattgttggtaacttaatgactgaaaaaattatggaa
aaaggagataaagatctcattttagctttagttgacgaaaacaatccagcttag
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