Schizosaccharomyces osmophilus (fission yeast): SOMG_04538
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Entry
SOMG_04538 CDS
T09274
Symbol
cwf5
Name
(RefSeq) Prp19 complex subunit, RNA-binding Cwf5
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SOMG_04538 (cwf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
som03041
]
SOMG_04538 (cwf5)
Spliceosome [BR:
som03041
]
Complex B
Other components
Prp19-related factors
SOMG_04538 (cwf5)
Complex C
SOMG_04538 (cwf5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_occluded
RRM_1
Nup35_RRM_2
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
80878011
NCBI-ProteinID:
XP_056039363
UniProt:
A0AAE9WFA7
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All DBs
Position
3:join(1071304..1071579,1071636..1071992,1072039..1072473)
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AA seq
355 aa
AA seq
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MSLVPKRDVNKIEWEDVEFPSICERCLGDNSYVRMTREPLGQECKICSRPCTIFRWSSSR
ERKRGKTQICVGCARLKNCCQACMLDLQFGLPIALRDAALKMVDSGPTNDINREFFAQNQ
QRLLKNEETPYDSQESNAVARNLVRKTERREPYQKPARRKLDEQESKQLLKDAKASDTSK
SSEKSLFPIKKIVNGRVLLSIDMEPPKDKKIASLFIMGVEDELPDYKIRKHFEQYGPLKS
VVCSHRAKCAFVNYKSRLSAEIAAASCPNGDLSIEGFRLKAQWGKPRSLGGPDQETRNAK
LADLVMHGKNTPEKSSNSEQSFNEADGAASSSAPTAAVAQPISPNQPKYPSQNTR
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtctctagtaccaaaacgcgatgttaataaaatcgaatgggaagatgttgaatttcca
agtatttgtgagcggtgtttaggagataattcgtatgttcgtatgactcgtgaaccttta
ggacaagaatgcaaaatatgttcacggccatgcacaatatttcggtggtcaagttcgaga
gaaagaaagagaggaaaaactcaaatatgtgtaggctgtgctagactgaaaaattgctgt
caagcgtgcatgctcgatttgcagtttgggttaccgattgctttacgtgatgcagcatta
aaaatggtggacagtggtccaacaaacgacattaatcgggagttttttgctcaaaaccag
cagagacttttgaaaaacgaagaaacgccatatgatagtcaagaatcaaatgctgttgct
agaaatctggttcgaaaaactgaacgacgagaaccttaccaaaaacctgcgcgaagaaaa
cttgatgaacaagaatctaagcaactattaaaggatgctaaagcaagtgatacatcaaaa
agctccgaaaaatcactttttcctattaaaaaaatcgtaaatggccgtgttttgctttca
atagacatggaaccacctaaagataaaaaaattgcctcccttttcattatgggtgttgag
gacgaactcccagattataaaatccgaaaacactttgaacaatatggtccccttaagtct
gttgtctgttcccatcgtgcgaaatgtgcttttgtcaactataaaagcagattaagtgct
gaaattgcagctgcatcttgcccgaatggagatctttctattgaaggatttcgtcttaaa
gctcaatggggtaaacctcgttccttaggaggaccggatcaagagactcgaaatgccaaa
ttggcagatctagtcatgcacggaaaaaatactccagaaaaatcttctaatagcgagcaa
tccttcaatgaagctgatggtgccgcctcatcttctgcgccgactgctgctgttgctcaa
ccaatctctccaaatcaaccaaagtatccatcgcagaatactcggtaa
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