Schizosaccharomyces osmophilus (fission yeast): SOMG_04591
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Entry
SOMG_04591 CDS
T09274
Symbol
mms19
Name
(RefSeq) CIA machinery protein Mms19
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
som03036
]
SOMG_04591 (mms19)
03400 DNA repair and recombination proteins [BR:
som03400
]
SOMG_04591 (mms19)
Chromosome and associated proteins [BR:
som03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
SOMG_04591 (mms19)
DNA repair and recombination proteins [BR:
som03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
SOMG_04591 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TraG_N
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
80878062
NCBI-ProteinID:
XP_056039490
UniProt:
A0AAE9WF67
LinkDB
All DBs
Position
3:join(1242224..1242311,1242363..1242452,1242507..1242569,1242616..1242748,1242796..1242890,1242936..1243078,1243129..1243232,1243284..1245584,1245637..1245685)
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AA seq
1021 aa
AA seq
DB search
MNSSLVASYLFTVDKNEDDAKDIINHIIRDLVDDKIGIVDVVTSIGDYLTNTNVSMRAKA
LLLLSQVLEGLPKDRLPVKHVSVLIQFYLNRLDDEVTLTENSLGIAALLHMDNFPAPKVV
EVCYCYFDATDMPKYSQQTRYSILKIFDIIIDEYLFDISPNTKDAFFAGICTIFAGEKDP
RNLFLVFSMLQKILKRFPIGGFEKQFFDITYCYFPITFRAPPDAQALTITTDDLKEQLQN
TLIATDAFSNLLLPELFKKLKASAVRVKIDALKIFIQACQIWHPNSYLWSCAEYWESIKQ
EILESTDTTLQNTALNALNLLAKNLYKENGLSSNFTDFVDIVITHSFENFSKDFTVKIAS
AVGAVFAAIASVSVESFNHCCDKHLGYIIELPTESETLEKRHGMLIFLNYVFKCNALLYG
KWRSQNVVDAPNPLLPHKNKFLSFMSGSLMGVAKDELDLRVSAVDVLFTLSTIKGYLDVN
ELTMIVQFLVELAFDLDDPLRKSATDKLKDIGLFKPDIILLVAFPHAFSLFPETSSKYSS
AEDAAFKHSLHILMTISEEKSLFKTLVIRMTEALKDQQNAAKHDSYFTSVILHNLCLAFR
NRNIQNRDDVPSYLESLVSWLYSISFKYAPISALSVKDLTSISQIINEIIRVCPLKNQIS
FSDDLWKLYFTNDESHLIQDDMSVRELSTQFCLEDAMTDQKYAGLVLLLQGGMNGLQRSV
PIIKDLHVTLLNSCIGTVEKATSPAVMLSALRLLSSLLNKCSKDEDINSYLQSPAVTTLY
KKAQSKDKGQSQTGVQILSWIAKALVSRKHQYANSVVNYLLDCLHLEDAASVVTGFAVII
RDDPALNKTNHYVERILYKQKFYAEVMPKLLEAIRKVTSKEKPFYLMVLSIVIGNVPEDV
VIPDMPTVLPLLLQCLMLEDSGVKYSALNVIMTAIKEMPSLISDYMNSLILPLLTIPKDI
NNPAAIRLLALKCLGLLPELISPIHMQPYRAKVIREMVPCLDDIKRVVRTEASRTRHKWY
T
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtagtttggttgcttcctacctgtttacagtggataaaaatgaagatgatgca
aaggacattataaaccatatcataagagatcttgtcgatgacaaaattggaatcgttgat
gtggttacttcaattggagattatttgaccaatacgaatgtttccatgcgagcaaaggct
ttgcttttgctttcccaggttttggagggattgccgaaagaccgacttcctgtaaagcat
gtgtctgtattgatccaattttatcttaatcgtttagacgatgaagttactttaacggaa
aattcgttgggaattgctgctttactccacatggacaattttccagcccctaaagttgtg
gaagtttgctactgctattttgatgccactgatatgcctaagtactcgcagcaaacgcga
tatagtattttgaaaatctttgatataattatcgatgaatacctatttgacatatcaccc
aatacaaaagatgcgttctttgcaggtatatgtacaatttttgcaggtgaaaaagatcca
agaaatttgtttttagttttctctatgctgcaaaaaatattaaaacgattccccataggt
ggatttgagaagcaattctttgacataacttactgttattttcccattacatttcgagct
ccccccgatgcacaagctttaacaatcacgacagacgatctgaaagaacaattgcagaac
accttgattgcaactgatgccttttcgaacttacttcttcccgaattgtttaagaaacta
aaggcttctgctgttcgtgtcaagattgatgctcttaaaatttttattcaagcctgccaa
atttggcatcccaattcttatttgtggagctgtgctgagtattgggaatccataaagcaa
gagatcttggaatctactgatacaacattgcagaatactgcgctcaatgcgttaaatctt
ttggcaaagaatttgtataaggaaaacggtttatcgtcaaacttcacagactttgttgac
attgttataactcattcctttgagaatttctcaaaagatttcaccgtaaaaatcgcttct
gcagtcggtgctgtttttgcagcaattgcttctgtttccgtggagagtttcaatcactgc
tgtgataagcatttagggtacatcatagagttgccaacggagtcggaaactctcgaaaag
aggcatggaatgctaatttttttgaattatgtgtttaaatgtaacgctttgttatatgga
aaatggagaagtcaaaatgtcgtagacgctcctaatcctttgcttccacacaaaaacaaa
tttttgagtttcatgtctggatctttaatgggcgttgcaaaggacgaattggatttgcgg
gtttccgctgtcgatgttttatttactctttctaccataaaaggatatttggatgtaaat
gaactcacgatgattgttcaatttttggtcgagctggccttcgacttggatgaccccttg
agaaaaagcgctactgacaaattgaaagacattggtttattcaagccagacattatatta
ttggtggcctttcctcatgctttttctttgttccctgagacatcatctaaatatagttct
gccgaagatgctgcttttaagcactcacttcatattttgatgaccatctctgaagaaaaa
agccttttcaaaactttagttattagaatgactgaagccttaaaagaccagcaaaatgcg
gccaaacatgactcttattttacaagcgtcatactccacaatctttgtcttgcttttcga
aatcgaaacattcaaaacagggatgatgtaccttcttatttagaaagtttggtatcctgg
ttatatagtattagcttcaagtatgctcctatttccgctttgagtgtcaaagatcttact
agtatttcacaaatcattaacgaaattatccgagtttgccccttgaaaaaccagatttct
ttctcagatgacctatggaaactttattttactaatgatgagtctcatctcatacaagat
gatatgtctgtaagagagttatcaacacagttctgtcttgaagatgcaatgactgatcag
aagtatgctggattagtattgcttctacaaggaggtatgaatggccttcaacgatcagtt
ccgatcattaaagacttgcatgtgactttattgaattcgtgcattggcactgtagaaaaa
gccaccagtccagccgtgatgttgtcggctttacgattgctatcttcacttttgaacaaa
tgcagcaaagatgaagatatcaatagctatcttcaatcacctgctgttacaactttatac
aaaaaagcacaatcgaaagataaaggacaatcccagacaggagtgcaaatcctatcttgg
attgcgaaagctttagtttccagaaagcatcaatatgctaacagtgtagtaaattaccta
cttgattgcttgcatttggaagatgctgcttcagttgtaactgggtttgctgttattatt
agggatgatccagccttaaacaaaaccaatcattatgttgaaagaatcctctataagcag
aaattttatgcagaggtgatgcctaagcttttagaagccatacgtaaagttacctccaag
gaaaagcccttctacttgatggttttatcgattgtgataggtaatgttcctgaagatgtt
gtgattcctgacatgcccactgtattacctttgctcctgcaatgtttaatgcttgaggac
agcggtgtgaaatattctgcccttaatgttataatgactgccattaaggaaatgccttcc
cttatttctgattatatgaactcattaatcctacctctacttactatccccaaggacatc
aacaatccagctgctattcgactactagccttgaaatgtttaggcttattaccagaactt
atttctccaatccatatgcagccttacagagcgaaagtgattcgtgaaatggtaccatgc
cttgatgacattaaacgtgttgtaagaacggaagccagccgaactagacataaatggtat
acatag
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