Schizosaccharomyces osmophilus (fission yeast): SOMG_04630
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Entry
SOMG_04630 CDS
T09274
Symbol
vps54
Name
(RefSeq) GARP complex subunit Vps54
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
som01009
]
SOMG_04630 (vps54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
som04131
]
SOMG_04630 (vps54)
Protein phosphatases and associated proteins [BR:
som01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
SOMG_04630 (vps54)
Membrane trafficking [BR:
som04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
SOMG_04630 (vps54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Ndc10_N
Motif
Other DBs
NCBI-GeneID:
80878099
NCBI-ProteinID:
XP_056039289
UniProt:
A0AAF0AWS0
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All DBs
Position
3:1323232..1326072
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AA seq
946 aa
AA seq
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MDERSIAPSSSYSYPSTEASFQVPLSQSADPTSSALSFKSLLEDPVNPTFPSYTPTRTEI
TPVALSPIPIVPSHDFQIYLHQIFHEYARYSKQKQASFHRYVERQTKRLSCNSGSSVHDS
HARRNSLSTARGELKSESSYPSSNSDTITFNREELPPSTPSVVDKFPLSTIPSIYFQDDF
NLDDPQTFDIASEHVDITQAGDAQHANRKLLLNNSMLQEKISWYLDIVELHLLHEIENAS
DSFPIIMENLKNLKKDEKTCLQDTHDFLENLNQITKARDEQREAISRQEQSCSQLHELIQ
SLSFLESLFTLSNQAHQSALDGHFLNAIDGIHSITSQLELKSKQESIDFSSLPAIIDLLE
DQHSLYNTISQTVIQKFPEILIQDIRDFSSQKSPSDLLNIYLKKNKKLRANTDPLPLVTD
FPPGFIKRLERFIDCLLLTDGLQSGLTIFKTSVFKELESLITQAFAKLNSLHRHTDRRSI
STTSLSSLSNSASQSLADGSNESNFNADFYNMLTTIYFTSLEVLRRLGQQLKLLIDILSR
KDQEQYHYSVALNDLMTISSELILQKITHINSAHFNASGSFSLQESLKLFTLHSLFYNEL
ENLCGITQNNFMSIVMQELQKWFRNDQLKSTQRIALDYEREKWEAISVSQEVQRMASRID
QCPTNVSDDWIFFQESSLNDIKNSKEEGESALSDTCFLQNQSIHMVSASVRVLESVDQYG
HLVYHFPRLSHDFYYGMIELLRTLNSRVYQLILGAGTVRSSGLTRVLGKHIALASQTVTL
LQALSTSVFKFLSKNYGIKQTQELLSLENDFNLHHNQITEKFIALMREKSNFCCGQIITV
NWVNEEPHDYMKDLIKNLVKLYKVLHRYSEPDCERVIPDVIKMFEDRLQLELTDLVQDPA
KWIGIKKDLSFFYDSLSSKCGYVGSAEVLKKFERAIGQNASDKLTT
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacgctcaattgctccgtcgtcttcttacagctatccatcgacagaggcttcg
tttcaagttcctctgtcacaatctgcggatcccacatcgtcagcattatcctttaagtct
cttctagaggaccccgtaaatccaacgtttccgtcgtacacacctactcgaacggaaatt
actcctgtcgccctttctcccattccaattgttccaagccatgatttccagatatatttg
catcaaatctttcatgaatatgctcgttattccaagcagaaacaagctagttttcatcgc
tatgtagaacgtcaaaccaaacgcctcagttgtaactctggttctagtgtgcacgattcg
cacgcacgtcgcaattcgttgtcaacagctcgaggtgagctcaaaagcgagtcctcgtat
ccatcatcgaattcagataccatcacctttaaccgtgaggagcttccaccttctactcca
agtgtcgtggacaaatttcctctatctactatcccatccatatactttcaagacgatttt
aatctcgatgatcctcagacgtttgacatcgcaagcgaacatgtcgatattactcaggct
ggagatgctcaacatgctaaccgaaaactattattaaataactccatgttgcaggagaaa
atttcttggtatcttgatatcgttgaacttcatttgttgcatgagattgagaatgctagt
gatagtttccctatcatcatggaaaatcttaaaaatcttaaaaaagatgaaaaaacctgc
ttacaagatactcatgactttttggagaacctcaatcaaataacaaaagctcgtgatgaa
caacgagaagccatttctagacaggagcagtcttgctcacagcttcatgaattaattcag
tcgctgtcatttttggagtcgctctttactttgagcaatcaagctcaccaatctgccctt
gatggtcatttcttgaatgcgatcgatgggatccattccatcacttcccaactagaatta
aaatctaagcaagaatccatcgattttagctccttgcctgccattatcgatcttttagag
gaccaacattctctatacaataccatatctcaaactgtaatccagaaattccccgaaatc
cttattcaagatatacgcgatttttcctctcagaaatctccctccgatttattgaatatc
tatttgaagaaaaataaaaagttacgggcgaatacggatcctttacccctcgttaccgac
tttcctcctggttttataaaaaggctggaacggttcattgattgtcttctccttacagat
ggtctccaatctggtttaactatatttaaaacttctgtattcaaagaactagagtctctc
attacacaagcctttgctaaactgaattctctacatagacataccgatcgtcgaagtatc
agtactacgagcctctccagcttatcgaattctgcttctcaatccttagcggacggatcc
aatgaaagtaattttaatgctgatttttacaacatgctcacaacaatttattttacatct
ttggaagttttgcgtcgactggggcaacaactgaaactgttaattgacatcttatcgaga
aaagatcaagagcagtatcattattccgttgctttaaacgatttaatgacgattagttcc
gaactcattttacaaaaaattacacacataaacagcgctcattttaatgcttcgggtagt
ttttctttacaggagtctctaaagttgtttacattgcattctttgttttataatgaactt
gaaaatctatgtggcatcacgcaaaacaattttatgtcgattgtcatgcaagaacttcag
aaatggttccgaaacgatcaattgaaaagtactcaacgcattgctttagattatgaaagg
gaaaagtgggaagctatttcagttagccaagaagtgcagagaatggcatctcgtattgat
caatgcccaactaatgtttcagatgattggattttttttcaagaatcaagtttgaatgac
ataaaaaactcaaaagaagaaggcgagtcagctttgtcagatacttgctttcttcaaaat
caatcaattcatatggttagtgcttcggtacgtgtacttgaaagcgtggatcaatacgga
cacttagtatatcactttccaagactctctcatgatttttactatggcatgatagagctt
ttacgaactttgaattcacgagtgtatcagctaattcttggagctggaactgtacgatca
tcaggactcactagggtattgggaaagcatattgcgttagcttcacaaacagtgactttg
cttcaagcattgtcaacatctgtgttcaaatttctctcaaaaaattatgggattaagcaa
acgcaagaattgctctccctcgaaaacgattttaacttacatcataatcagattactgaa
aagtttattgctctcatgagagaaaaatcaaacttttgttgcggtcaaattatcacagtt
aactgggttaatgaagagcctcatgattatatgaaggaccttattaagaatctggtcaaa
ttgtataaagttttacaccgttactctgaaccggattgcgaacgcgttattccggatgtc
ataaagatgtttgaagacagattgcagctggaactcacagatcttgtacaagatcctgca
aaatggattggtataaagaaagatttgtcatttttttacgattcattatccagcaagtgt
ggttatgttggtagtgcagaagtactcaaaaaatttgagcgtgcaatagggcaaaatgcc
tctgataaattgactacatga
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