Schizosaccharomyces osmophilus (fission yeast): SOMG_04702
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Entry
SOMG_04702 CDS
T09274
Symbol
rpo41
Name
(RefSeq) mitochondrial RNA polymerase Rpo41
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
som03029
]
SOMG_04702 (rpo41)
Enzymes [BR:
som01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SOMG_04702 (rpo41)
Mitochondrial biogenesis [BR:
som03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
SOMG_04702 (rpo41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Motif
Other DBs
NCBI-GeneID:
80878170
NCBI-ProteinID:
XP_056039547
UniProt:
A0AAF0AZN0
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All DBs
Position
3:1485609..1489112
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AA seq
1167 aa
AA seq
DB search
MFSQRQLQRCLLRTRFCRVNVRGRRLIQTESLQSAEENVNVYKPILPSKKYEFKINTDQK
SEMVSLYEACVFTNDFVRSAQLLGRIAGYNAMDENMYPYIELYLRHLINSGSFTLDSMIR
TTRAILKKSKLPGNSTIYAYYFQAALLKEAEESGYPVLHRMAVEWRYRKGRVVDILSQTS
VLNSEQIQKIIRILNIPLESLSSNQLALFGFQPSNLAEKDTVRNTAEEEESQPKAVPATE
HVYIDKIKSKGMRLSALLKSLNNISVSPENLPVDEVSLEKVPSSELVNLARQKLLEKSAV
ASAIDLWKAEYEDTFHRGGALPKNKEASALFYQWYTELKEMFNQENKRLDAFYHRIETNA
GNPYIAEGFCGPFLKLLKTEKLAALTIIEVIRSISSISSQEEVEETHGVLISRLTDAVGR
SFEREFLSERIQVEEREGKLRIRDNLKYVFNNPRAFRAAVKELRRNADENDGKWKHALES
WPRYVTTKIGAIAVSLFLQAAKMDIKFKRPDTGDNTKESVFAFAHTYQYIHGRKSGVLRP
RVELLKLIASEFQNPLIHPQMLPMLVRPKPWVQWDKGGYYYSRESIIRLKGCTEQLDYVK
EASRKGHLKKVYNALSALGDVDWRVNRFTFDVIVKIWNLGEGMLSIPPKNVEVNLPPYPK
QALNPNDRVAWYSLRDKLSREKATAHSQRCDFNYKLEIANSYLNERFYFPHNMDFRGRVY
PISAHLHHVNNDFCRGLLEFAEGKPLGPNGLSWLKVHLANLFGISKVDYASRQKFVDDNI
EQVFDSYDHPLEGRKWWTSAEDPFQALAAIAEIARATRSGNPENYVCHVPVQQDGTCNGL
QHYAALGRDPDGAHEVNLSPNDRPKDVYDAVAKIVISRLEQESAKGDELATALKDKIDRS
VVKPTVMTNVYGVTYVGAKNQIISQLEKRGDIPKDMLNNYSSYLTKMVFRALRALFERAH
EIQDWLSTCSYLISNSLPAEYIKEGHKDKLTPTIWTTPLGFPIIQPYRNFKKRQVQTNLQ
SVCIEDRDRVASVEPRKQAAAFPPNFVHSLDATHLFMTCLKAKEAKITFASVHDSYWTHA
CDVEQLGSLLRQAFVELHSQKIMEKLRNEFRKRYKNFMISKDIARRYDLFISSEDADKKW
VPLKIPLLPSQGTFDLTKVLESKYFFS
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgttttctcaaaggcaacttcagcgatgtcttttacggacgcgattttgtagagttaat
gtgcgtggtcggcggctaatacaaacggagtcattgcaaagtgctgaggaaaatgtgaat
gtatacaagcccattcttccttccaagaagtatgaattcaaaattaatacagatcaaaag
tcagaaatggtgagtctgtatgaggcatgtgtattcacgaatgattttgtccgttcagca
cagcttctggggcgcatagctggttataatgcaatggatgaaaatatgtacccatacatt
gaattatatctacggcacctaatcaattccgggagttttacgctggattctatgatccgg
acaacgagggcaatcctcaaaaagtctaaacttcccggtaattccacgatttatgcatat
tattttcaagcggccttattaaaagaagcggaagaatctggatatcccgttttgcatcga
atggctgtcgaatggagatacagaaaaggtagagtcgtcgatattctatcccagacgtca
gtactaaacagcgagcaaattcaaaaaattattagaatccttaatatccctttagaatcc
ttatccagtaaccaactagccctttttggttttcagccgtcgaatttagccgaaaaggat
actgtaagaaatacagcagaagaagaagaatcccagccaaaggccgtacctgcaactgaa
catgtttacattgataaaataaaaagtaaaggaatgcgtttgagtgccctactaaaatca
ctaaacaacatttctgttagtcctgaaaacttaccagtggatgaagtatctttggaaaag
gtacctagctcggagcttgtcaatttggcgaggcaaaagcttctggagaaatctgccgtt
gcttctgctattgatttgtggaaggctgagtatgaagatactttccatcgtggaggagct
ttacccaaaaacaaagaagcttctgccttattttaccagtggtatacagaactcaaggag
atgttcaaccaggagaataaacgccttgacgctttttatcatagaatcgaaacaaacgca
ggcaacccatatatagctgagggcttttgcggcccttttctgaagcttctaaaaacggaa
aaacttgctgctttaacgattatagaagtaattcgctctatttcttcaatttcaagtcaa
gaggaagttgaggaaacgcacggggttttgatttctcgtttaactgatgctgttggacgg
agttttgaacgtgaattcttatccgaacgtatacaagtagaagaaagagagggaaagctt
cgcataagagacaatttaaagtatgtttttaataatcctcgtgcatttagagctgctgtg
aaagagttgaggcgtaatgccgatgagaacgacggtaaatggaagcatgctttggaaagc
tggccaagatatgttaccaccaagattggtgcaattgcagtgtcattgttcttacaggct
gctaaaatggatattaaatttaagcgcccggataccggggacaatacaaaagaatctgta
tttgctttcgctcatacctatcaatatattcatggaaggaagtctggtgtacttcgtccc
agagttgagctcttaaaattaatagcaagtgaattccaaaatcctcttatccatccacaa
atgctcccaatgttggtacgtcccaaaccatgggtgcaatgggacaaaggaggttattat
tactctcgagagtcgataatccgtttgaagggctgtactgagcagttagattatgttaag
gaagcttcccgtaaaggtcatcttaagaaagtctataacgcgttaagcgcacttggtgat
gtggactggagagttaatcgcttcacgtttgatgttatagttaaaatctggaatttaggt
gaaggtatgctcagtattcctcccaaaaatgtagaggtgaatcttcctccttatccaaag
caagccctcaatccgaatgatcgtgtagcatggtacagccttagggataaactttctagg
gaaaaggcaactgcccactcacaacgctgtgattttaactacaaacttgaaatcgctaat
tcatatttaaatgaaagattctattttcctcataacatggatttccgaggaagagtatac
ccaatctctgcacatttacaccatgtaaacaatgacttttgtcgtggtttactagagttc
gctgagggaaagccattaggtcctaatgggcttagttggctgaaagttcatttggcaaat
ttgtttggtatcagtaaagttgattatgctagtcgtcaaaagttcgtggatgacaacatt
gaacaagtttttgattcgtatgatcatcctttggaaggacgcaaatggtggacgtctgct
gaagatccttttcaagctcttgcggcaattgcagaaatcgcaagagcaacacgctccgga
aaccccgaaaattacgtttgtcacgtcccagtgcagcaagatggaacctgtaatggatta
caacattatgctgccctaggaagagatcccgatggtgctcatgaagttaatctgtctcca
aacgatcggcctaaagatgtctatgatgcagtagctaagattgtgataagcagattggaa
caagagtctgccaaaggtgatgaattggccaccgctttgaaagataaaatcgacagaagt
gttgtgaaacctacggttatgactaacgtttacggtgttacttatgtgggtgccaaaaat
cagattatcagtcagttggaaaaacgaggagatattcctaaagatatgctcaacaactat
tctagttatttgactaaaatggtgttccgagcccttcgtgctttatttgaaagagctcat
gagattcaagattggctgtctacttgttcgtaccttatttcaaattctttgccggcagaa
tatattaaggaaggtcataaggataaactgacgcccactatttggacgactccccttggg
tttcctattatccagccttataggaactttaaaaaacgacaagtacagacaaacttacaa
tcagtttgtattgaagatagggatagagtagcttccgttgaacctagaaaacaagctgct
gcttttcctcccaattttgtacattctttagacgcgacacatttgtttatgacatgtttg
aaagccaaggaagcgaagataacctttgcttctgtccatgactcttactggacccatgct
tgcgatgtcgaacagttaggtagtttgttgcgacaagcttttgttgaattacattcacag
aaaattatggaaaagctgagaaatgagtttcgaaagcgatataagaactttatgatttct
aaagacattgcaaggaggtacgatttgtttatatcttctgaagatgctgataaaaaatgg
gtgccacttaaaatcccacttctaccctcacagggtacttttgatttaacaaaagttttg
gaaagtaaatatttcttttcgtga
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