Schizosaccharomyces osmophilus (fission yeast): SOMG_04718
Help
Entry
SOMG_04718 CDS
T09274
Symbol
pop100
Name
(RefSeq) RNase P and RNase MRP subunit Pop100
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SOMG_04718 (pop100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
som03009
]
SOMG_04718 (pop100)
03016 Transfer RNA biogenesis [BR:
som03016
]
SOMG_04718 (pop100)
03029 Mitochondrial biogenesis [BR:
som03029
]
SOMG_04718 (pop100)
Enzymes [BR:
som01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
SOMG_04718 (pop100)
Ribosome biogenesis [BR:
som03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
SOMG_04718 (pop100)
Transfer RNA biogenesis [BR:
som03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
SOMG_04718 (pop100)
Mitochondrial biogenesis [BR:
som03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
SOMG_04718 (pop100)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_N
POPLD
POP1_C
GCV_T
Motif
Other DBs
NCBI-GeneID:
80878186
NCBI-ProteinID:
XP_056039627
UniProt:
A0AAE9WH51
LinkDB
All DBs
Position
3:1518130..1520208
Genome browser
AA seq
692 aa
AA seq
DB search
MKRFGQKTQSKDTNVKRSKFADARHIQVESPALKNGAVDIKRFVESRSFEISALQDAMHR
SKHSSAQRAFQALPRCLRRRAASHNIKRIPKALRDRAYYEMQLSSSATTPVTPSKQRLKR
FIKRLHRKLARHGSSPKITNSGQLQTEHSTENSRIPLLPAVKLVNGKFAGRQLRKVWLPT
HLWTAKRAHMMNAWGYAIPESPTEKSYRPTHRAAFCLNAIAFDMSYQPLFAITGPLRVLQ
ETFGDCFTTGLPSAYTKTYRSFNSYVKNSQTNELLCPCLLQWHNPSEDCKTKFPIRNNGS
AVQLVVRLHASAFLDAWNHLSSIAVVDDQIAMHDWRLQLASFDILGPDANVVLHDIFPDV
QSSEKRTWESVSKLPTTSLPFGASIDFDAPLVNHESELRQEGNGKKKDNKESKSNEAPDS
EFGLLWDKHETPSFNVFNYVQQKKDLPLNVQKDLVPVYLTHQPKWNGVTVILPWEAAKFF
WQKLMFRKGVRFGGLKNLHQIAFEKKMPFFPADYPDTKSGQAYEVQRKQRNEEYWRRRPP
AKRVNFENFGKNFSEIGDPFSCDWDCFRDDSHSNTIERTAQFFKRVEVRMVQRGALHDRA
RVYSIDHGKIDVWKKLIYDKKITAEAAEYPPCPETDALCGFVTTANFNLTAGRPSGIATI
KSGVLDGESQGYCLIRNVGCSIPRLAQWKILL
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgatttggtcagaaaacacaatcaaaagataccaatgtgaaaaggtcgaaattc
gccgatgctagacatattcaagtagaatctcctgcgttgaagaatggtgctgtcgatata
aaacggtttgtagaatccaggtcctttgagatttctgccttacaagatgctatgcatcgg
tcgaaacactcaagtgctcaacgagcctttcaagctcttccacgatgtctgagaagacgt
gcggcttcccacaatataaaaagaatcccaaaggccctacgggatcgtgcttattatgaa
atgcagctaagttcttctgcaacaacccccgttaccccttccaagcaacgcctaaagaga
tttataaaacgacttcatagaaagttagctcgccacggtagtagtcctaaaattacaaac
tctggacagctacaaacagagcactcaactgaaaattctaggatcccattactgcctgca
gtgaagttagtaaacggaaaatttgctggacggcaattacgaaaagtttggttaccgact
cacctttggactgccaaacgtgcccacatgatgaacgcatggggttatgcaataccggag
agtccaactgaaaagtcttatcgacctacccacagagctgctttttgtttgaatgccatt
gcatttgatatgtcttatcaaccattatttgctattactggacctctaagagttttacaa
gaaacatttggagattgctttaccacaggactacctagtgcatacacaaaaacttatcgt
tcgttcaatagttatgtcaaaaattcacaaacaaacgagcttttatgtccttgtttatta
caatggcataatcctagcgaagattgcaaaactaaatttccgatccgcaataatggaagt
gcagttcaactagttgtccgactccatgcttctgcttttttagatgcatggaaccattta
tcaagcattgctgttgtagatgatcaaattgctatgcacgattggagattgcaattggct
tcttttgacattttgggtcctgatgctaatgtagttcttcatgacatttttccagacgtt
caatcttcagaaaaaagaacatgggaatcagtgtctaaattacctactacttctcttcca
tttggcgcatctatcgatttcgatgccccgttggtaaatcatgaatctgaattgagacaa
gaaggaaacgggaaaaaaaaagataataaagaaagtaaaagcaatgaagctccagacagc
gaatttggtttattgtgggacaaacatgaaacaccttcttttaatgtttttaattatgta
caacagaaaaaagacttaccgctgaacgttcaaaaggacttagtgcctgtttacttaacc
catcaaccaaagtggaatggggtaactgttatattaccttgggaggcagcgaaatttttt
tggcagaaattaatgtttcggaaaggtgtacgatttggaggactgaagaatttacatcaa
attgctttcgaaaaaaagatgcctttctttcctgctgattatcctgatacaaagagtggt
caggcatatgaggttcaacgaaagcaacgtaacgaggaatactggaggagacggccacca
gcaaaaagagtgaactttgaaaattttgggaagaatttctctgagattggtgacccattt
agttgtgattgggattgcttccgggatgattcacactccaataccatagaacgaactgct
cagttcttcaaaagagttgaagttcgaatggtgcaaagaggtgctttacacgatcgggct
cgagtttatagtatagatcacggcaaaattgatgtttggaaaaaactgatttacgacaaa
aagataacagcggaggctgctgaatatcctccttgtccggagactgatgcattatgtggc
tttgtgacaactgcaaattttaatctcactgctggcaggccttcaggcatcgctactata
aaatctggagtgctggatggagaatcccaaggctattgccttattcgtaatgtgggctgc
tctatccctcgattggctcaatggaagatattgctttaa
DBGET
integrated database retrieval system
