Schizosaccharomyces osmophilus (fission yeast): SOMG_04804
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Entry
SOMG_04804 CDS
T09274
Symbol
ssb2
Name
(RefSeq) single-stranded DNA binding protein Ssb2
KO
K10739
replication factor A2
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03030
DNA replication
som03420
Nucleotide excision repair
som03430
Mismatch repair
som03440
Homologous recombination
som03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SOMG_04804 (ssb2)
03420 Nucleotide excision repair
SOMG_04804 (ssb2)
03430 Mismatch repair
SOMG_04804 (ssb2)
03440 Homologous recombination
SOMG_04804 (ssb2)
03460 Fanconi anemia pathway
SOMG_04804 (ssb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
som03032
]
SOMG_04804 (ssb2)
03400 DNA repair and recombination proteins [BR:
som03400
]
SOMG_04804 (ssb2)
DNA replication proteins [BR:
som03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
SOMG_04804 (ssb2)
DNA repair and recombination proteins [BR:
som03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
SOMG_04804 (ssb2)
MMR (mismatch excision repair)
SOMG_04804 (ssb2)
DSBR (double strand breaks repair)
HR (homologous recombination)
SOMG_04804 (ssb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
RMI2
UPF0147
Motif
Other DBs
NCBI-GeneID:
80878270
NCBI-ProteinID:
XP_056038983
LinkDB
All DBs
Position
3:join(1698173..1698295,1698374..1699045,1699099..1699125)
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AA seq
273 aa
AA seq
DB search
MAFDPYNKGGFGSGFSGTFSPGTGGGGFNDYDPSSQPSVDRQQGIGNKLRPVTIKQILDA
TQVHADAEFKIDGVEVGQVTFVGVLRNIHQQTTNTTYQIEDGTGMIEVRHWEHIDALSEL
ATDTYVRVYGNIKVFSGKIYIASQYIRNIKDHNEIHYHFLEVIGVHIHFTQKPQLTGNAA
SAFGNSLPNAASAPAANSLEQKLAEYSLTPTQIIVMQAIHNAPDTNEGVHARQLAQSVGP
GIDLTAVTDFLQQEGIIYTTIDENHFKSVLQDQ
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgatccctataataaaggaggttttgggtcaggttttagcggaaccttttct
ccaggaacgggaggaggtggattcaatgactatgatccatccagtcaacctagtgttgat
agacaacaaggaattgggaataagctccgtcctgtaactattaagcaaatattggatgct
acgcaagtccatgctgatgcagagttcaagatagacggagtcgaagttggtcaagtaacc
tttgtaggcgtcttgagaaacattcaccaacaaacgacaaacacaacttatcaaattgag
gatggcacaggcatgattgaagtacggcattgggagcacattgatgctctctcagaactg
gctaccgatacgtatgttcgtgtatacggaaacatcaaggtgttttccggaaaaatatat
attgcatcccaatacattcgaaatataaaagatcataatgagattcattatcactttttg
gaagtcataggcgttcacatacactttacccagaaaccccagttgactggtaacgccgct
tctgctttcggtaattcccttcctaatgctgcttctgctcccgctgccaattctctcgag
cagaaactggcagaatactctttaacccctacacaaataatcgttatgcaagctatacat
aatgctcctgataccaatgaaggtgtgcatgctcgacaacttgctcaaagcgttggtcct
ggcattgatcttaccgctgtcaccgacttcctacagcaagaaggcattatttacacaaca
attgacgaaaaccactttaagagcgtcctgcaagatcagtga
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