Schizosaccharomyces osmophilus (fission yeast): SOMG_04840
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Entry
SOMG_04840 CDS
T09274
Symbol
nup97
Name
(RefSeq) nucleoporin Nic96-like protein
KO
K14309
nuclear pore complex protein Nup93
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SOMG_04840 (nup97)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_04840 (nup97)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SOMG_04840 (nup97)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
80878306
NCBI-ProteinID:
XP_056039310
UniProt:
A0AAE9WEV6
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Position
3:complement(join(1803691..1806019,1806070..1806263))
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AA seq
840 aa
AA seq
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MTVEPKRVQKPTCSLPLLDTKSRKLVGELLQPSLPFIQLNLGQLEQRAIQSHNHIPPSKD
GNTKAHYLLAGSGINAERTWKKIESLSLHAKPPTTLELSFTDVDMFLKYQREKNVLYSLE
ALIQDAQSQFDKYLELEWQGKKSGVREFPESSTSQEKKLATVTQNNARSRVFAASLKTCY
SDVSQSSPGSNYVSSFCQVAKELSKDTKSLLLYETWNLLRSFISYDGSSDPLLGSKSQLF
PFYEDSLSKVRLNQRIIDCSRRFLEKQFFDVVNKEIANNPQAASIGGVPSVVNKIRAYIN
IRFSKNGVWTNSNIEFLGDLPVWAFIFYLLRAGYLDEAVAYAEQNHNFFEERQATDFPTY
LKAYLKAPNSIIPKELRNKLFSEFNQTLRFQEDYDPFKYAVYKIIGRCELSKTSCPSVCF
VTEDYIWLQLSLAREFTETNISAHECFSLQDVQKLVVSYGPDYFTKQGSYPVMYFFLLML
CGLYEHAIEFLYSYYPTDAVHFAITCAHHGLLHTASPKSSPPLDTLLVNDTAGQPSLRYE
AMLMSYVKGMQENDAVTSACYLASMCEVTEYAPVCHEALKDLILSTRDYVHLVGDIRADG
ERISGFLESRYSILKLSSQEEFLTKITFHSAKIADDQGLWSDSVLLYHLAEAYDVVISVV
NRCLGSALLGFMDQGVFPEKLISLVKNMMNVYGKNPSIYSKINYKNRETTDLLLLTVEAF
HAYVNKDYEQVLAALQQIEILPLDTECDSHVVRKLAAEFRFLNDSLLHNIPGIILVAMKS
INELYKKQKSSAYNNDSIANTKLQFYRMKARKIVMYSSLIDFRMPSHILEQLNRCEIEMT
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgactgtagaaccaaagagggttcaaaaaccgacttgttcgctgcctttattggacacg
aaatctaggaaacttgttggcgagctgttacagccgtctttgccttttattcagttaaac
ttgggccaacttgagcagcgtgcgattcagtcacataatcatattccaccaagcaaagat
ggaaatacgaaagcacattacttgctcgcgggaagtggaataaatgctgagagaacatgg
aagaaaattgagtcactatcgcttcatgcaaaacctcctacaactcttgaactttctttt
acagacgtggatatgtttttgaaataccaaagagagaaaaatgtgctatattcgcttgaa
gcccttattcaggatgcccagtctcagtttgacaagtatctggagcttgagtggcaggga
aagaagtcaggtgtaagggaatttccggaatcatctacttctcaagagaaaaagctggca
acagtaacccaaaacaatgctcgcagccgggtatttgctgcttcattaaagacgtgttac
tccgatgtttctcagtcttcacctggctcaaattatgtttcatctttctgccaagtcgca
aaggaattgtcaaaagatacgaagtcacttcttttgtatgaaacttggaatttattacgt
tctttcatttcttatgatggttcttcagatccattactcggatccaaatcccagttgttt
cctttctacgaagatagcctttctaaagtacgtctaaatcaaagaattattgactgctct
agacgtttcttggaaaagcaattctttgatgttgttaataaagaaatcgcaaacaaccct
caagctgcttccattggtggcgtaccctctgttgtaaataaaattcgtgcatatattaat
attcgattctcaaaaaatggtgtttggacgaattcgaatattgaatttttaggggactta
ccggtttgggcattcatcttctatctgctgcgtgcgggctacctggatgaagccgtcgca
tatgctgaacaaaatcacaacttttttgaagagagacaagccaccgatttccctacttac
ttgaaggcttatttgaaggctccaaactcgataattcccaaagaattgcgaaacaaactt
ttctctgaattcaatcagacgctccgtttccaagaagactatgatcctttcaaatatgcc
gtgtataaaataattggccgctgtgagctttccaaaacatcttgtccctctgtttgtttt
gtgactgaagactatatttggttacagctttcccttgcacgagaatttactgaaacgaac
atatctgctcatgaatgcttttccctgcaagatgttcaaaaattggtggtgtcatacggc
cctgattattttactaagcaaggctcttatcctgttatgtattttttccttttaatgtta
tgtggtctttatgagcatgctatcgaatttttatatagttattatcctacagacgctgtt
cattttgctatcacatgtgcccatcatggtttgctgcacaccgcttctccgaaatcttcg
cctcctcttgatactttacttgtaaatgatactgcaggtcaaccaagcctgcgatatgaa
gcaatgttgatgagctacgttaaaggcatgcaggaaaatgatgcagttacttctgcttgc
tatttagcgagtatgtgtgaagttacagaatatgcccctgtctgtcacgaagctttgaaa
gatctaatcttaagtacccgtgattatgttcatttagttggcgatattcgtgctgacggc
gaacgtatttccggatttttggagagtcgatactcgatattaaagctttcatctcaggaa
gagtttctaacaaagataactttccactctgctaaaattgctgatgatcaagggctatgg
tctgattcagttttgctatatcatttggctgaggcttatgatgttgttatctccgttgtc
aatcgatgcttgggttctgcattgttaggatttatggatcaaggcgtgttcccagaaaaa
cttatctcattagtcaaaaatatgatgaatgtttatggaaagaacccttctatatacagt
aagattaattacaaaaacagagaaacgacggatttgttactactcactgtggaagctttc
catgcttatgtaaacaaagattacgaacaagtcttggctgccttacaacaaatagagata
ttgcctctggatacagagtgtgattctcacgtggttcgtaagttggcggctgaattccgt
tttcttaatgacagcctgctacacaatataccgggaattattttggttgctatgaaaagt
atcaatgagctttataaaaagcagaaatcatctgcttacaacaacgattcgatagcaaac
acgaagctacagttctatcgtatgaaggcacggaaaattgtaatgtacagctcattaata
gacttccgtatgccttcacacatattggagcaattaaatcgttgtgaaattgaaatgacc
tag
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