Schizosaccharomyces osmophilus (fission yeast): SOMG_04842
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Entry
SOMG_04842 CDS
T09274
Symbol
tfg1
Name
(RefSeq) transcription factor TFIIF complex alpha subunit Tfg1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SOMG_04842 (tfg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
som03021
]
SOMG_04842 (tfg1)
Transcription machinery [BR:
som03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
SOMG_04842 (tfg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Ada3
Motif
Other DBs
NCBI-GeneID:
80878308
NCBI-ProteinID:
XP_056039709
UniProt:
A0AAF0AX42
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All DBs
Position
3:join(1807877..1808419,1808498..1808593,1808645..1809616)
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AA seq
536 aa
AA seq
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MDLKDTKPFSNVKQEPTDVKEPKVEEKPAQDAATPQNQQKFLDFQLSWCPKNERKTTNHH
LLKFHSNKTIDPLKTFVPPIKMQRRDPHASSSSNNEQQSAEPGTSSNMDASSIAPYGGAQ
NMKQNAFKRKTRQVVKVDPQVRRLQEEELSPWIMEDFEGKNTWVSTMEGGQSSAYVLFMF
SENGFKVIPADRFYRFNQRSNFQTLSIDEAEAKMNKKTPIPRWFMKKDNNEEGGSSEGAA
SPMYHLKTVPNARTVSGPRTTGSDDELDFDEEFADDEEAPIVEGNEEDNKQLEEKMKKEM
LTANLFGEAEEPNFEEEQERQISHEGKKLQRYLKLLEKNLAYESDEEDENPYASPNEASS
EEEVLKEEEELQKREEKVKSRFSASKATTPKPTGTPSANLSPQHPVSQLSSPSQSFVQSK
PSEPIVKGPGYVVFRISSEKLSQFASDFPPLHPKIVATPSSEAIVGADGGANVNTDDSNL
ITDAEVIQALKSGPITIKDLIHLFHAKFKADTRNRTVIQKVIRKVARFENKLLVLK
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaaagataccaaacccttttcgaatgttaagcaggaacctacagatgtgaaa
gaacccaaagtagaagagaaacctgctcaagatgcagctactccacaaaatcaacaaaag
tttttggatttccaactttcctggtgtcctaaaaatgaaagaaaaactacaaaccaccat
ttattaaaattccattccaataaaaccattgatcctctgaaaacattcgtgccacccatc
aagatgcaaagaagagatccccatgcctcttcttcatcaaacaatgaacagcaatctgcc
gagcctggtacttctagtaacatggatgcatcttctattgctccttacggaggagctcaa
aacatgaagcagaatgctttcaaacgaaagacccgccaagttgtcaaggtggatccacaa
gtccgcagacttcaagaggaagaattgtcgccgtggattatggaagactttgaaggaaaa
aacacatgggttagcactatggagggaggtcaatcctctgcttatgtcttatttatgttt
tctgagaatggatttaaggtcattccagctgatcgtttctatcggttcaatcagcgtagt
aactttcagaccctctctatagatgaagcagaggccaagatgaacaaaaagacacccatt
cctcgctggtttatgaaaaaggataataatgaagaaggggggtcttcggagggcgctgct
tcgcctatgtatcatctcaaaactgttccgaatgctcgtaccgtttctggtcctaggaca
acgggaagtgatgatgaattagattttgatgaagagtttgcagacgacgaagaggcaccc
attgtcgaaggaaacgaggaggataataaacaattggaagagaaaatgaagaaagaaatg
cttactgccaatctattcggtgaggctgaagagcctaacttcgaagaggaacaagagcgc
cagatatctcacgaaggcaaaaagcttcaacgttatctcaaattactcgagaaaaatttg
gcgtatgaaagtgatgaagaagatgagaatccctatgcttcacccaatgaggctagtagt
gaagaagaggtacttaaagaagaagaagagttacagaagcgtgaagaaaaggttaaatct
cgtttttcagcttccaaagctactacacccaaacccactggtaccccgagtgccaacttg
agccctcaacatccagtttcccaactcagttcgccttcgcaatcgtttgtacaatctaaa
ccttcagagcctattgttaaaggtcccggatatgttgtttttcgaatctcgagcgaaaag
ctctcccagtttgcttctgactttcctcctcttcatcctaaaattgttgctactccttcg
tcggaagcgattgttggagcggacgggggagctaatgttaatacggacgattctaatctt
attactgatgctgaagtcatacaagctctcaagagtggacctatcactattaaagatttg
attcatctatttcacgccaaattcaaggcagacaccagaaatcgtacggtcattcagaaa
gttattcgaaaagttgccagatttgaaaacaaattgttggttttgaaatga
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