Schizosaccharomyces osmophilus (fission yeast): SOMG_04843
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Entry
SOMG_04843 CDS
T09274
Symbol
lsc2
Name
(RefSeq) succinate-CoA ligase beta subunit Lsc2
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som00020
Citrate cycle (TCA cycle)
som00640
Propanoate metabolism
som01100
Metabolic pathways
som01110
Biosynthesis of secondary metabolites
som01200
Carbon metabolism
Module
som_M00009
Citrate cycle (TCA cycle, Krebs cycle)
som_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
som00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SOMG_04843 (lsc2)
00640 Propanoate metabolism
SOMG_04843 (lsc2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
som04147
]
SOMG_04843 (lsc2)
Enzymes [BR:
som01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
SOMG_04843 (lsc2)
6.2.1.5 succinate---CoA ligase (ADP-forming)
SOMG_04843 (lsc2)
Exosome [BR:
som04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SOMG_04843 (lsc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
Motif
Other DBs
NCBI-GeneID:
80878309
NCBI-ProteinID:
XP_056039313
UniProt:
A0AAE9WFQ2
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All DBs
Position
3:complement(1809976..1811277)
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AA seq
433 aa
AA seq
DB search
MLSRSILRKSARTFTPHVQKRNLALHEYLSHDILRKFNVDVPRGGVAKSGEEAEKVAQKL
GVSDLVVKAQVLAGGRGKGQFESGLRGGVRSVYDPTEAKMFSEQMIGHKLITKQTGPAGK
PCNSVYVCERKYVRREYYFAILMNRDEQCPMIVASDQGGVDIEGVAAENPSAIIKRSLPN
TPTLDRSIAEEVVTKLGFTPACKEQAIDSISKLYKVFNDCDATQVEINPLAETTDQKVLC
MDAKLSFDDNAEFRHPDIFAERDITQEDPDEAQAGKVGLNFIKLDGSIGCLVNGAGLAMA
TMDIIKLHGGEPANFLDVGGNANAEAIRKAFSLITKDNKTTAIFVNIFGGIVRCDVIAQG
LISVVSSLDLNIPIICRLQGTNQHAAKDVINNSGLRIFSFDDLDEAAQKACRYSRVVEMA
REANVNVSFELPL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaagaagcattttaagaaaatcagcacgtacttttactcctcacgtgcagaag
cgtaacttggctcttcatgagtatctttcacacgacatacttcgcaagtttaacgtcgat
gtgcctcgtggtggtgtcgccaaatcgggcgaagaagctgaaaaggtagcccagaaactc
ggcgtcagtgacttggtagtcaaggcccaagtcttggctggtggccgtggtaaaggccaa
tttgaaagcggtcttcgcggtggtgttcgttccgtttacgaccctactgaagcaaaaatg
ttttccgagcaaatgatcggccataagcttatcaccaagcaaactggtcctgctggtaag
ccttgtaacagtgtttatgtctgtgaacgtaagtatgttcgtcgtgaatattatttcgct
attttgatgaaccgtgatgaacagtgtcccatgatcgtcgcctctgatcaaggtggtgtc
gatatcgagggtgttgctgctgaaaaccccagtgctattattaaacgctcccttcccaat
acccctaccttggaccgctctattgcagaggaggttgtcaccaagcttggcttcactccc
gcctgcaaagagcaagccatcgactctatttccaagctatacaaggtttttaatgactgt
gatgctactcaagtcgaaattaacccccttgctgaaactaccgatcaaaaggttctttgc
atggatgctaagcttagcttcgatgataatgctgaattccgccatcccgatatctttgcc
gaacgtgatatcacccaagaagatcctgatgaggctcaagctggcaaggttggtttgaac
tttattaagttagatggtagcatcggatgtcttgtcaatggtgctggtcttgccatggcc
accatggatatcattaagcttcacggcggtgagcctgctaacttcttggatgtcggtggt
aatgctaatgccgaagccatccgtaaggcattctctcttattaccaaggataacaagact
actgccatttttgtcaacatctttggcggtatcgttcgctgtgatgttattgcccaaggt
cttatttccgttgtttctagcttagacctcaacattcccatcatttgccgtttgcaaggt
actaatcaacatgccgccaaggacgttatcaacaactctggtcttcgtattttctctttc
gacgatctcgacgaagctgctcaaaaagcttgccgttacagccgtgtcgttgagatggcc
cgtgaagctaatgtcaacgttagctttgagctccctctttga
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