Schizosaccharomyces osmophilus (fission yeast): SOMG_04862
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Entry
SOMG_04862 CDS
T09274
Symbol
sap18
Name
(RefSeq) histone deacetylase complex subunit Sap18
KO
K14324
histone deacetylase complex subunit SAP18
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03013
Nucleocytoplasmic transport
som03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SOMG_04862 (sap18)
03015 mRNA surveillance pathway
SOMG_04862 (sap18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_04862 (sap18)
03036 Chromosome and associated proteins [BR:
som03036
]
SOMG_04862 (sap18)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
SOMG_04862 (sap18)
Chromosome and associated proteins [BR:
som03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
SOMG_04862 (sap18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
80878328
NCBI-ProteinID:
XP_056039146
UniProt:
A0AAE9WIE5
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All DBs
Position
3:complement(join(1845961..1846234,1846400..1846563))
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AA seq
145 aa
AA seq
DB search
MNFTSSRSQSPVSSESDPAVGPCPFLIQVYHQFHTRNHILDVLEDVVPSIEIYGWINMSL
YELAVFIAEKTLFQQDDTKHPEWMLQFRFVFHDQIKGRPSSREMGTVCLHNPKLFQGSKL
LKVTGMKCGDRVDVCIKPNKIRLRK
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgaattttacttcgagtcggtctcaatcgccggtttcaagtgaaagtgatcctgccgtt
ggcccttgtcccttcctcattcaggtctatcatcaatttcatactagaaatcacatttta
gatgtattagaagatgtcgtaccctcaattgaaatttatggatggataaatatgagttta
tacgagctggcggttttcatcgctgaaaaaacgttgtttcagcaagatgatactaaacat
ccagagtggatgcttcagtttcgcttcgttttccatgaccaaattaaaggaagaccctcc
tcaagagagatgggaacagtatgtttgcacaatccaaagctatttcaaggaagcaagctg
ctgaaggtgactggaatgaaatgtggagatcgtgttgatgtttgtatcaagccaaacaaa
atacgtctccgaaaatga
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