KEGG   Schizosaccharomyces osmophilus (fission yeast): SOMG_04894
Entry
SOMG_04894        CDS       T09274                                 
Symbol
rsa4
Name
(RefSeq) notchless-like ribosome biogenesis protein Rsa4
  KO
K14855  ribosome assembly protein 4
Organism
som  Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:som00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:som03009]
    SOMG_04894 (rsa4)
Ribosome biogenesis [BR:som03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    SOMG_04894 (rsa4)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 EIF3I WDR55 DSE1_N WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd ASA1 NBCH_WD40 Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_EIPR1 CFAP251_N PAC11 Beta-prop_NOL10_N Beta-prop_DCAF4 NLE eIF2A Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N WD_LRWD1 Beta-prop_Vps41 Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_WDR75_2nd Tricorn_2nd Beta-prop_NWD2_C Beta-prop_HPS5 Ge1_WD40 Beta-prop_ACSF4 Beta-prop_VPS8 Nucleoporin_N Tricorn_N PD40 Cytochrom_D1 Phage-Gp8
Other DBs
NCBI-GeneID: 80878359
NCBI-ProteinID: XP_056039785
UniProt: A0AAF0AYF8
LinkDB
Position
3:complement(join(1912459..1913070,1913123..1913419,1913466..1913861,1913916..1914119))
AA seq 502 aa
MATLLPPKSKKQKKEEQNPTPFEVPEKYPLVNIQFRASDDSHEVPSLLVPGNSSARQLDI
LLNQLLGSPEDPVPYTFALKHGEDAVEIPDNLYTTVFHSGLMKTEDHLTLLYTPQAVFRV
RAITRCAASMNGHDGTIISAQFSPSSSARLVTGSGDCTARLWDCDTQTPISTLKGHQNWV
SCISWAPDASIIATGSMDNTIRLWEPKKGAPIGDALRRHTKPIMALCWQPLHLSPESGPY
LLASGSKDNTVRVWNTKLRTLVYTLSGHTAPITCVKWGGQNWIYSASYDKTIRIWDAKDG
KCLHILKGHAARVNHLSLSTEHVLRSGAYDHTDFKPKNFREERDKAKERYEICVKQSGER
LVSASDDLQLMLWDPYKTTKAVAKMHGHQKVVNYASFSPDGRHIATASFDSSVRLWDAKT
GKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRTKKLKCDLPGHIDQVFAVD
WSPDGQRVASGGADKAVRIWTH
NT seq 1509 nt   +upstreamnt  +downstreamnt
atggcgactttgcttcctcctaaaagcaaaaaacagaaaaaggaagaacagaaccctact
ccgttcgaagttcctgaaaaatatccactcgtaaatattcagtttcgagcctcagatgac
agccatgaagttccttctcttttggtccctggaaacagttcggctcgtcaattagatatc
cttttaaatcaattgcttggttctcccgaggatcccgttccttacacctttgctttaaaa
catggtgaagatgctgtggaaattcctgataacctttatactactgtgtttcatagtggt
ctcatgaaaaccgaagatcatttaacattgttgtatacccctcaagcagttttccgggtt
cgcgcaatcactcgatgtgcagcttcaatgaacggacatgacggcactatcatctctgcc
cagttttctccaagctctagcgctcgcttggttactggaagtggtgactgcacagccagg
ttatgggactgcgatactcaaacccccatctctactctgaaaggacatcagaattgggtt
tcttgtatttcatgggctccagatgcctctatcattgctactggaagcatggacaatact
atccgtttatgggaaccaaagaaaggcgcccccattggtgatgcacttcgccgtcatacc
aaacctattatggccctttgttggcagcctcttcacttgagtccggagtctggtccatat
ttacttgcctctggctctaaagataacaccgttcgtgtttggaacaccaaacttaggact
cttgtatatacactttctggtcacactgcacccatcacttgtgtcaaatggggtggacag
aattggatttattctgcttcatatgataaaaccattcgtatatgggatgccaaggacgga
aaatgtttacacattttaaagggacacgctgcccgtgtcaatcatttgtctttgtctacg
gaacatgttttgcgctctggtgcttatgatcataccgattttaaacctaagaactttcgt
gaggaacgcgacaaagctaaagagcgttatgagatatgtgtaaaacaatccggcgaacgt
cttgtttctgcaagcgatgacttacaattaatgttatgggatccttataaaaccactaaa
gctgttgccaaaatgcacggtcaccagaaggtagtaaactatgcatcattttctcccgat
ggtcgtcatattgcaactgccagtttcgatagttcggtgcgcttgtgggatgcgaagaca
ggaaaattccttgctacgctacgtggacatgttgccgctgtttatcagtgtgcttggtct
accgattccagattacttgtaagctcttctcaagatacgacgttgaaggtctgggatgtc
cgtacgaaaaagttgaagtgtgatttgccaggtcatattgaccaggtatttgccgtagac
tggtcgcctgatgggcaacgcgttgcctcaggaggtgccgacaaagctgtacggatatgg
acgcattaa

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