Schizosaccharomyces osmophilus (fission yeast): SOMG_04945
Help
Entry
SOMG_04945 CDS
T09274
Symbol
lsm8
Name
(RefSeq) Lsm2-8 complex Lsm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03018
RNA degradation
som03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
som00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SOMG_04945 (lsm8)
09123 Folding, sorting and degradation
03018 RNA degradation
SOMG_04945 (lsm8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
som03019
]
SOMG_04945 (lsm8)
03041 Spliceosome [BR:
som03041
]
SOMG_04945 (lsm8)
Messenger RNA biogenesis [BR:
som03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
SOMG_04945 (lsm8)
mRNA degradation factors
5'-3' decay
Lsm complex
SOMG_04945 (lsm8)
Spliceosome [BR:
som03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
SOMG_04945 (lsm8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Gemin6
Motif
Other DBs
NCBI-GeneID:
80878409
NCBI-ProteinID:
XP_056038910
UniProt:
A0AAE9WG96
LinkDB
All DBs
Position
3:join(2028065..2028089,2028139..2028307,2028363..2028453)
Genome browser
AA seq
94 aa
AA seq
DB search
MSLADFVEKKVQVITNDGRVVLGFLRGFDHTTNLILSESIERIITLDQDAETIPLGVYLL
RGENVAIVGLVNESLDADIDWEKIRGEPIPDIVH
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgagcttggctgactttgttgaaaagaaagttcaagtcattacaaatgatgggcgtgtt
gttttaggcttcttgcgaggatttgaccatacaacaaatttgattctttcagagtctata
gaaagaattattactttagaccaagacgcagaaacgattcctttaggtgtttatttgtta
cgcggtgagaatgtagctatcgttgggctggtaaatgaaagtttggacgccgatattgat
tgggaaaaaattcggggtgagccaattcctgatattgttcattag
DBGET
integrated database retrieval system
