Schizosaccharomyces osmophilus (fission yeast): SOMG_04965
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Entry
SOMG_04965 CDS
T09274
Symbol
pep3
Name
(RefSeq) HOPS/CORVET complex subunit, ubiquitin-protein ligase E3 Pep3/Vps18
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Pathway
som04138
Autophagy - yeast
som04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
som00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
SOMG_04965 (pep3)
04148 Efferocytosis
SOMG_04965 (pep3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
som04131
]
SOMG_04965 (pep3)
Membrane trafficking [BR:
som04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
SOMG_04965 (pep3)
Hops complex
SOMG_04965 (pep3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
COG4_N
DUF5890
zf-RING_UBOX
Beta-prop_EML_2
G-gamma
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
80878429
NCBI-ProteinID:
XP_056039114
UniProt:
A0AAE9WH99
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Position
3:complement(join(2070853..2072840,2072882..2073358,2073409..2073652))
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AA seq
902 aa
AA seq
DB search
MSIAEDWVDPASSENTELQKDFYYRKNELNNERRSLFSIEKVQLQFPVSIRCLAVENNIL
VMALTSDKLMIVDLEKPEEIVDIELPKKALALGLTYRIFLDPSGRYIFVSTTAGDNCLFT
PSRQGRVLTKLKGHTIESVMWKFSENNNLELLLASRSGAILELVLTLDATNVKRLEKSIN
TVYSFPESEAPLDMLLSSQEDAEKDYLVVATNQRLLKFSKGNKFNSDQHYFSPFLQGEIN
ELYHISDDECVQCVSHSPYPQISAEPYTIAIKTNKRIVYHDLINETSSLIQEYQFIESPR
LSVSTVEMNLLLTPFHIAVFDLDTLYFINRISQKEVYQQKVTLSPHEEILGLSCDHEKNT
YWLYTTESLHELVVNNELGDVSLVFLQKEEYIKALACANTPKVRNTVLDGYADYLMKIGD
YEKAATFFAETLKSVEEVALSFIEIGQKDVLRQYLWKKVKSYKASMKFQREILVNWLLES
LLGRLNDLDEEERLELFPDAIIEKRQRVLFEFSRLLAQYKDDINKELAYNLANNYGKEEQ
LLQIATVMKDQSYIMHYWVQRENYDKALKTLNEGVDQETLIQHATALLTHRPMETVSIWE
RQTDMDVHALIPSLLSYNQRARVSVEENAAIRYLKFVTGVLGCAEPSIHNTLFCIYACHS
SSNESYLMNYIEQQGDHPLYDMDLGIRLCLQFNCRRSAVKILVLLKLYSQGVELALEEKD
YELAASVANMPEDDLALKKSLWRTITKAMFSSTENIKESIKFLEQSNVLPLTELIRLLPE
QISLDDLRDNICDELESCREQIGQLGLEIDQATEVAEAVRTNSDDLKNRYIVLDHSEPCW
HCHHLLFSEPFVLFPCQHAFHRQCMFKHRLTSVSENDILKECQLCGPSYTVRLLDEPFPD
TF
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgagtatagcagaagactgggtcgatcctgcatcttctgagaatacagagctacaaaaa
gatttttattatagaaaaaacgaactgaataatgaacgaagaagcttattttctattgag
aaagtccagctgcaatttcctgtttcaatacgttgtttagctgtcgagaataacatcttg
gtcatggcactcacaagcgataaactgatgattgttgatctagaaaaaccggaagagatt
gtggacattgaacttccgaagaaagctttagcactcggactcacatatagaattttctta
gatccttcaggacgttatatatttgtctcaacaacagccggtgataattgcctgtttact
ccttctcggcaaggtcgagttttgacaaagctgaaaggtcacacgattgaatcggtgatg
tggaaatttagtgaaaataataatttggaactactacttgcttctaggtctggagctata
ctcgagcttgttttgacgttagatgcaactaatgtgaaacgacttgaaaagtctataaat
actgtctattcttttccagagtcagaagctcccttggatatgttgttgtcaagccaagaa
gacgctgaaaaggactaccttgtggttgctactaatcaacgactcttaaagttttcaaag
ggaaataaatttaattcggatcagcactatttttctcctttccttcagggagagattaat
gaactatatcatatatccgatgatgaatgtgttcaatgcgtgtcacattctccctatccc
cagatttctgctgaaccctacacgattgcaataaaaacgaataagaggattgtctatcat
gatcttataaatgaaacatctagcttgattcaagaatatcaatttattgagtcaccgcgt
ctctcggtgtcaactgtagaaatgaacttgctgctcactccctttcatatagcagttttc
gatttggatactctatattttatcaacagaattagccaaaaggaagtttaccaacagaaa
gttaccctttcccctcatgaagaaatattagggctctcttgtgatcatgaaaaaaacaca
tattggctatacacaacggagagtcttcatgaactggtggtcaataatgaattgggtgat
gtctctctggtattcttacagaaagaagagtacataaaggctttggcatgtgctaatact
ccaaaagtgcgaaacactgttttggatggctatgctgattatctaatgaaaataggcgat
tacgaaaaggctgctaccttttttgctgaaactcttaaatcggtggaagaggttgctttg
agcttcatagaaattgggcagaaagatgttctgagacagtatctgtggaaaaaggtaaag
tcttataaagcttctatgaagttccaacgagagattttagtaaattggcttctggaatca
ttgttgggaagactaaacgatttagatgaagaagagagacttgagttatttccagatgcc
ataattgaaaaacgtcaacgggttttatttgagttttcaagacttttagcacaatataaa
gatgacatcaataaggaactcgcatataatcttgcaaataattatggaaaagaagaacag
ttgctgcagatcgcaacagtgatgaaagatcaatcctatattatgcattactgggtacag
cgagaaaactacgataaagcactaaaaacgttaaatgagggtgtggatcaggagaccctt
atacagcatgcaactgctttattaacccatcgtccaatggaaactgtaagtatatgggag
cgtcagacagatatggatgttcatgctttaataccgtctttgctgagctataaccaacgt
gcccgagtttctgttgaagaaaatgcggcaattcgctacctgaaatttgtaactggggta
ttagggtgcgcagaaccttctatacataatactctattttgtatttacgcatgtcattct
agctcaaatgagtcttatctaatgaattatattgaacaacaaggcgatcatcctttatat
gacatggatcttggaattcgactttgtttgcaattcaattgccgtaggagtgctgtgaag
attttagtattattgaaattgtacagtcagggtgttgaattggctctggaagaaaaggat
tatgaactagctgcttccgttgcaaatatgcccgaggatgatttggcgttgaagaaaagt
ctttggcgaaccattacgaaagcgatgttttcatcaacggaaaatataaaagaatcaatt
aaatttttagagcaatcgaatgttcttccacttacagaacttattcgacttttaccagaa
cagatctctcttgacgatttgagagataatatttgtgacgaactggaaagttgtcgagaa
caaatcgggcaattagggcttgaaattgaccaagcaacggaggttgctgaagctgtacgt
acgaattccgacgatttaaaaaacagatatattgttcttgaccatagtgagccctgctgg
cactgtcatcatctgttattctctgagccttttgttttgttcccttgtcaacatgctttt
catagacaatgcatgtttaaacatcgacttactagtgtttctgagaatgacattttaaag
gaatgtcagctttgcggtccttcatatactgtccggctactagatgaaccctttcctgac
acattttga
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