KEGG   Schizosaccharomyces osmophilus (fission yeast): SOMG_04994
Entry
SOMG_04994        CDS       T09274                                 
Symbol
rec14
Name
(RefSeq) Ski complex subunit Rec14
  KO
K12601  superkiller protein 8
Organism
som  Schizosaccharomyces osmophilus (fission yeast)
Pathway
som03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:som00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SOMG_04994 (rec14)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:som03019]
    SOMG_04994 (rec14)
Messenger RNA biogenesis [BR:som03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     SOMG_04994 (rec14)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_SPT8 WD40_RFWD3 NBCH_WD40 Beta-prop_EIPR1 Kelch_6 eIF2A Beta-prop_IFT122_1st Beta-prop_IP5PC_F Beta-prop_DCAF12 WDR54 Beta-prop_NOL10_N WD_LRWD1 Kelch_2 Beta-prop_DCAF4 DUF4987
Other DBs
NCBI-GeneID: 80878458
NCBI-ProteinID: XP_056039666
UniProt: A0AAF0AZY8
LinkDB
Position
3:complement(join(2127513..2128132,2128183..2128471))
AA seq 302 aa
MRREYLVSHIQENAHEADIYSLCVISGRLWSCSGDSKIKQWNVDSAEHELVEEIDTPHKI
GIHNMATSLDERLVVSCGFGQDVYLWDPSTNSSRSLGDSVEHPGECWAACISPDAQTISF
TTVDGHVCVWDTHSNIKVADLDTKGKFGLCTAYSPNGRFIASGHQTGQLFLISTETGRLF
HTLSGHTLPLRSLAFSPGSSLLAAAGDSKMITVYDVVSGDQVGQLRGHSAWIFALAFNPV
GDLLLSADIEGRVKVWDMDTMECISTKNEVDGGIWAVAWYNNGFAVAGADRSILWYRAAA
SE
NT seq 909 nt   +upstreamnt  +downstreamnt
atgagaagagagtatttagttagccatattcaagagaacgctcacgaagctgatatttat
tcattatgtgtcatttcaggacgattgtggtcttgttctggggattcaaaaattaagcaa
tggaatgtggatagcgcagaacatgaacttgttgaagaaatagatactcctcacaaaatt
ggaatccataatatggctacctcgttggatgaacggctagtcgtttcgtgtggtttcgga
caagacgtgtacctgtgggacccaagcacgaattcgtctcgatcactaggtgattctgta
gaacatccaggagaatgctgggctgcttgtataagtccagacgcacaaactatttccttt
actactgttgatggacatgtttgtgtatgggacacacatagcaatatcaaggtggccgac
ttggacaccaaaggaaaattcggtttgtgtacagcgtactcgccaaatgggagattcatt
gcgtcaggacatcaaacaggacaattattcttaattagcacggaaacaggtcgattattc
catactctgtcaggacacacgctcccattgcgaagtctagcattttcacctggttcctcc
ttgctagctgcagcaggagactccaaaatgattacagtatacgatgttgtttcaggagac
caagtaggccaacttcgtggtcacagtgcctggatctttgcattggcgtttaatcctgtt
ggagacttgcttttgtcagctgacatagaaggccgtgttaaggtttgggatatggataca
atggaatgtattagtacaaaaaatgaagttgacggcggcatctgggcggtagcttggtac
aacaatggatttgcagttgctggtgccgacaggagcattctttggtacagagccgccgct
tctgaataa

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