Schizosaccharomyces osmophilus (fission yeast): SOMG_05095
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Entry
SOMG_05095 CDS
T09274
Symbol
rcm1
Name
(RefSeq) rRNA (cytosine-5-)-methyltransferase Rcm1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
som03009
]
SOMG_05095 (rcm1)
Enzymes [BR:
som01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
SOMG_05095 (rcm1)
Ribosome biogenesis [BR:
som03009
]
Eukaryotic type
Other ribosome biogenesis factors
SOMG_05095 (rcm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Methyltransf_4
Methyltransf_15
Methyltransf_25
RsmF-B_ferredox
GidB
FtsJ
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
80878558
NCBI-ProteinID:
XP_056037719
UniProt:
A0AAE9WDY6
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All DBs
Position
2:join(936521..936656,936706..936764,936816..938048)
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AA seq
475 aa
AA seq
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MDFYIHAATILDDLSQRKGSIKQLVFNSKKHDPKRTYALVCETLKYKHVLDEVIQCAKLP
DLEKKIKKNLVRVLVHDLLMSKRGISASTGSIKEAILQHKTRLNAEFVKLKIRNKVKSHE
ELALKNPVTIPRWVRINTVKATKEEVLKQLALTQVSSLKEVGPGKYYMDEIIDNLIALDS
EISLTNESCYQDGKIIIQDKASCIPAAILGNQRQTKVGDIIDGCAAPGNKTTHLAALFPT
AKIFAFERDGQRVQTLQKMVNISGVQNVEIIHGDFTRSDPMDSKFANVTHILLDPSCSGS
GIVSRQDFLLEESEQDVVEDVSRLENLCSFQSTILKHALQFPESRYVTYSTCSVHRLENE
QVVCDVLSQNPQWKCNTLENTFPQWEDRGIPEYCTDPTMAKSMIRCVPGKFGTIGFFVCN
LYHPGRAGNLSEKDISNAVDNNAKRKRKNKKKKSTKRKKEKKLEVAESSTTDATV
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggatttttatattcatgctgctacgattcttgatgatttaagtcagagaaaaggttct
attaagcaactcgtatttaattcaaagaagcatgatcctaaacggacgtacgcgctggtc
tgcgagactttaaaatataaacatgttttggacgaagttatacaatgtgcaaagctaccg
gatttagagaaaaagataaaaaaaaaccttgtaagggttttggtacatgatttattgatg
tcaaagcgtggaataagtgcatcgacgggctcgataaaagaagcgattttgcaacacaag
actcggttgaatgcagagtttgtaaagctgaaaatccgcaacaaagtaaagtcgcacgaa
gagttagcattgaagaacccagttactatccctcgttgggttcggataaatacagttaaa
gcgacgaaagaagaagtacttaagcaattggcactgacccaggtgtcttctctaaaagaa
gtgggaccaggaaaatattacatggatgaaattatagataacttaattgcacttgacagt
gaaatttccttgaccaacgaaagttgctaccaggatggaaagattattattcaagacaaa
gcttcgtgtatccctgcagcgattttggggaatcagcgacaaacaaaagtaggagacatc
attgacggatgtgcggctcctggtaacaagacaactcatttggcagctttgtttcccact
gcaaaaatatttgcttttgagcgggacggtcagcgagtgcaaacacttcagaaaatggta
aacatatccggggtgcagaatgttgaaattatacatggagattttactcggagtgatcca
atggactctaaatttgcaaatgtcacgcatattttgctagacccatcctgttccgggtcg
ggaattgttagtcgtcaggactttttgcttgaagagtccgaacaagacgtagtggaagat
gtaagccggttggaaaacctgtgtagttttcaatctaccattttgaagcatgcattgcag
ttccccgaatcccgttacgttacatattctacatgctctgtacaccggcttgaaaacgag
caagtcgtttgcgatgttttgtcgcaaaatccacaatggaaatgcaacaccttggaaaat
acattcccccaatgggaagatcgtggcattccagaatactgcacagaccccacgatggca
aagtcaatgattcgttgtgttcctgggaaatttggaacgattggattttttgtttgcaac
ttgtatcacccgggacgtgcaggaaatttgtcggagaaagacatttcgaatgcagtagac
aacaatgccaaacggaaaagaaagaataaaaagaagaaaagcaccaagagaaaaaaggaa
aagaagctggaagtagctgagagttctaccacagatgctactgtctaa
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