Shewanella oneidensis: SO_0003
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Entry
SO_0003 CDS
T00099
Symbol
mnmE
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification system GTPase subunit MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
son
Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
son03016
]
SO_0003 (mnmE)
Transfer RNA biogenesis [BR:
son03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SO_0003 (mnmE)
Prokaryotic type
Methyltransferases
SO_0003 (mnmE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
Ras
AIG1
ABC_tran
Gtr1_RagA
AAA_28
Roc
DUF4702
SRPRB
MMR_HSR1_Xtn
Arf
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AAN53090
UniProt:
Q8CX52
LinkDB
All DBs
Position
complement(2589..3950)
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AA seq
453 aa
AA seq
DB search
MTTDTIVAQATAPGRGGVGIIRISGDKATNVAMAVLGHLPKPRYADYCYFKSASGQVIDQ
GIALFFKGPNSFTGEDVLELQGHGGQIVLDMLIKRVLEVEGIRIAKPGEFSEQAFMNDKL
DLTQAEAIADLIDATSEQAAKSALQSLQGEFSKEVHELVDQVTHLRLYVEAAIDFPDEEV
DFLSDGKIANALYKIIDKLIAVQASAKQGSIIREGMKVVIAGRPNAGKSSLLNALAGKES
AIVTEIAGTTRDVLREHIHLDGMPLHIIDTAGLRDTTDTVEQIGIERAWNEINSADRVLF
MVDGTTTTAVDPHDIWPDFINRLPTNLGVTVIRNKADLTGENLEMTEEKGYSVYRISAKT
GLGVDELKQHLKSLMGYQSNLEGGFIARRRHLEALEIAASHLQLGKEQLEVYLAGELLAE
ELRMAQLALSEITGRFTSDDLLGKIFSSFCIGK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtgacaactgacactatcgtggcacaggccaccgcgcccggacgaggcggagtgggtatc
atacgtatctcaggtgataaggcgacgaacgttgccatggccgtattaggtcatttgcct
aaaccccgttatgccgattattgctactttaaaagtgcctctggccaagtcatagaccaa
ggcatagccttgttctttaaaggcccaaactccttcaccggtgaagatgttttagagcta
cagggccacggcggtcaaatcgttctcgacatgttgatcaaacgcgtgctcgaagttgaa
ggcattcgcatcgccaaacccggcgagtttagtgaacaagcctttatgaacgacaagctc
gacttaacccaagccgaagccattgccgaccttattgatgctaccagtgaacaagcggct
aaaagcgcgctgcaatcgctccaaggtgagttttcaaaggaagtgcatgagctggtggac
caagtcacccatctgcgtttatacgtcgaagccgccattgatttccccgatgaagaagtc
gactttttaagtgatggcaaaatagccaatgcgctgtataaaatcatcgacaaactcatt
gctgttcaggccagtgccaagcaaggttctatcattcgtgaagggatgaaagtggtgatt
gctggtcgtccaaatgccggaaaatcgagcctactcaacgcccttgcaggtaaagagtcg
gccattgtgaccgaaattgccggtaccacacgcgatgtgttgcgcgaacatatccattta
gatggtatgccgctgcatattatcgacaccgcaggtttacgcgatacaaccgataccgtt
gaacaaattggtatcgagcgcgcatggaatgaaatcaacagcgccgatcgggtgttattt
atggtcgatggcacaacaaccacggctgtcgatccccacgatatttggcccgattttatc
aatcgcctccccaccaatttaggggtaactgtgatccgtaataaagcggatctcaccggt
gaaaacctcgaaatgaccgaagaaaaaggctatagcgtctatcggatctcggccaaaaca
ggcctcggtgttgacgagttaaaacagcaccttaaatcgctaatgggttatcaaagcaac
ctcgaaggtggctttatcgcccgtcgccgtcaccttgaggccttagaaatagccgcaagc
catctgcaactcggtaaagaacaattagaagtttacctcgcgggcgaactattagcggaa
gaactgagaatggcgcaattagccctatcggaaattaccggacgttttacctcagacgat
ctactcggcaaaatttttagctcattctgtatcggtaagtaa
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