Shewanella oneidensis: SO_0037
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Entry
SO_0037 CDS
T00099
Symbol
rimN
Name
(GenBank) threonylcarbamoyladenosine t(6)A tRNA modification protein RimN
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
son
Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
son03009
]
SO_0037 (rimN)
03016 Transfer RNA biogenesis [BR:
son03016
]
SO_0037 (rimN)
Enzymes [BR:
son01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
SO_0037 (rimN)
Ribosome biogenesis [BR:
son03009
]
Prokaryotic type
Other maturation factors
SO_0037 (rimN)
Transfer RNA biogenesis [BR:
son03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SO_0037 (rimN)
Prokaryotic type
SO_0037 (rimN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
STPPase_N
EAD11
Motif
Other DBs
NCBI-ProteinID:
AAN53124
UniProt:
Q8EKQ3
LinkDB
All DBs
Position
41557..42123
Genome browser
AA seq
188 aa
AA seq
DB search
MLQLHPSDIKDVVLNGGVIAYPTEAVYGLGCDPDNDTAIQKLLAVKQRPWQKGLILVASE
FSQLLAYVDESQLTDEQLELAFSKWPGPFTFVMPIKPHVSRYLCGEFDSIAVRVSAHEGV
RALCQALGKPLVSTSANLAGEDPALSGDEILNVFEGKIDALVLGQLGEQRQPSTIIDARS
GKILRNGQ
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaactgcacccatctgacattaaagacgtagtgttaaacggtggggttatcgct
tatcccaccgaagccgtttatggcttaggttgtgaccctgataatgataccgccattcaa
aagttactcgccgtgaaacaacgtccttggcagaaaggacttatcttagtggcgagtgag
ttttcgcagttattagcctatgtcgatgaatcacagctgaccgatgagcagctcgaattg
gctttctccaaatggcctgggccttttacctttgtcatgccgattaaacctcatgtctcg
cgttatttatgtggtgagtttgattcgatagccgtacgtgtgtccgcccatgaaggggtg
cgagctttatgccaagccttaggtaaaccactggtctcgaccagtgccaatttagccggc
gaagatcccgcgctcagcggcgatgagattctcaatgtctttgaaggcaaaattgatgcc
ttggtgctgggtcaattaggtgagcaacgtcaaccctccaccattattgatgcccgcagc
ggcaagattttacgcaatggacagtaa
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