Shewanella oneidensis: SO_0072
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Entry
SO_0072 CDS
T00099
Name
(GenBank) transcriptional repressor of ABC-type efflux system GntR family
Organism
son
Shewanella oneidensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
MarR
HTH_Crp_2
MarR_2
HTH_36
Fe_dep_repress
HTH_DeoR
HTH_IclR
Rrf2
HTH_24
HTH_27
HTH_23
TrmB
HTH_11
ANT
LexA_DNA_bind
DnaD_N
Staph_reg_Sar_Rot
HTH_38
HTH_29
DUF6891
HTH_Tnp_ISL3
Spo0A_C
Penicillinase_R
HTH_5
DUF4423
Motif
Other DBs
NCBI-ProteinID:
AAN53159
UniProt:
Q8EKM0
LinkDB
All DBs
Position
84353..84724
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AA seq
123 aa
AA seq
DB search
MLELLNVNPSSGEPIYKQLHEQIVRLIVGGQLQAEDVLPSVRQIAEYLAVNPMTVSRAIQ
QLVDQGWLERRRGQATRVAARTEAMESGVSLLEPQLDGLLAQAKQLGVSLPELLQLINER
WQA
NT seq
372 nt
NT seq
+upstream
nt +downstream
nt
atgttagaacttttaaatgtcaaccccagcagtggggagccaatttacaagcaattacac
gagcaaatcgtgcgcttgattgtgggcggccaactgcaagcggaagacgtattaccttca
gtacgccagattgcggaataccttgcagtaaacccgatgacggtatcccgtgcgattcag
caattggtggatcagggctggttagagcgccgccgtggacaggcgactcgggttgctgcc
cgtaccgaggcgatggaatcgggcgtgagtctgcttgagccacaattagatggcttgttg
gcacaagccaagcagctgggcgtgagcctgcctgagttgctgcaattgattaacgagcgc
tggcaagcctag
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