Shewanella oneidensis: SO_0075
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Entry
SO_0075 CDS
T00099
Symbol
icfE
Name
(GenBank) long-chain-fatty-acid--CoA ligase IcfE
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
son
Shewanella oneidensis
Pathway
son00061
Fatty acid biosynthesis
son00071
Fatty acid degradation
son01100
Metabolic pathways
son01212
Fatty acid metabolism
son02024
Quorum sensing
son04146
Peroxisome
Module
son_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SO_0075 (icfE)
00071 Fatty acid degradation
SO_0075 (icfE)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SO_0075 (icfE)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SO_0075 (icfE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
son01004
]
SO_0075 (icfE)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
son04147
]
SO_0075 (icfE)
Enzymes [BR:
son01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SO_0075 (icfE)
Lipid biosynthesis proteins [BR:
son01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SO_0075 (icfE)
Exosome [BR:
son04147
]
Exosomal proteins
Exosomal proteins of breast milk
SO_0075 (icfE)
Exosomal proteins of breast cancer cells
SO_0075 (icfE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AAN53162
UniProt:
Q8EKL7
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All DBs
Position
87061..88854
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AA seq
597 aa
AA seq
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MSLEQYHVIRLLQQQSQSLKEAIALEGFEMAAPWHQVSWQAFDEISHKIAQVLIQLGVQV
QDRCVILSQNCPQWTCADVGTLKSRAIVVPIYPTSTVEQASFIVNDAAAKVIFVDDAKQY
ALACELQTLCPTLEHVIVFDAAVQLAQDKPQHKHLDSLLALEYDQSAELEQRLKDANLDD
LLTLIYTSGTTGDPKGVMLDYRNMASTVHQHDLILPFKTGDVSLAFLPLSHVFERGWSFY
VLCRGGRNVYLQNTQRVKEAISAVRPHTLCVVPRFLEKVYSAVQDKVAKSAEGRKKLFAW
AMGVGERQFEVSQGRVKGGLWLSLQWRLANKLVYSKLQAVLGGRLKFMPCGGAALDLNVA
SFFHAIGIPVLCGYGMTETNATVTCNTLDNRVAGSNGKVLPEIQIKLGKDDEILVRGDTV
MRGYYNRPEDTAAAFEDGWLKTGDAGRLDAHGNLFITDRIKELMKTSNGKYIAPQRVEGT
VGRCPFIEQVAVIADARNYVTALIVPAFESLEAWAKEKGLKYESPIELLRHSHVVEHFEQ
RLKHLQQELAGFEQIKKFTLLPEAFSMEAGLITPTLKLRRKMIYHKYVHEINAMYNN
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcgaacaatatcacgtaattcgactattacagcagcaaagccagtcgttaaag
gaggctattgcgctggaaggttttgaaatggcagccccttggcatcaagtcagttggcag
gcatttgatgaaatcagccataaaatcgcacaagtgttaattcaactcggcgtacaagtg
caagaccgctgcgtgattctgtcgcaaaactgccctcaatggacctgtgccgatgtcggc
accctgaaaagccgcgccattgtggtaccgatttatccaaccagcactgtcgagcaggcg
agctttatcgttaacgatgctgctgccaaggtgatttttgtcgacgatgccaagcaatat
gcgctggcctgtgagctgcaaacgctttgcccgaccttagagcatgtgattgtgttcgat
gccgcggtgcaactggctcaagataaacctcagcataaacatttagatagcttactggcg
ttggaatatgaccaaagtgctgagctcgaacagcgtttaaaagacgctaatctcgatgat
ttgttaaccctgatttatacctccggcacgactggcgaccctaagggcgtgatgctggat
taccgcaatatggcctcgactgtgcatcagcacgatctgattttgcctttcaaaaccggc
gatgtgtctttggctttcctgccgcttagccatgtgtttgagcgtggctggagcttctat
gtgctgtgccgcggtggccgcaatgtgtatttgcagaatacccaaagagtaaaagaggcg
attagtgctgtgcgtccgcataccctatgcgtggtgccgcgtttccttgagaaggtttac
agtgccgtacaggataaagtcgctaaatctgccgagggccgtaaaaaattattcgcttgg
gcgatgggtgttggcgaacgtcagtttgaagtcagccaaggccgtgttaagggcggtttg
tggttatctttgcagtggcgtttggcgaacaagctggtttacagcaagttgcaggctgta
ctcggtggacggttaaagtttatgccctgtggcggtgctgcactcgatttaaatgtggcg
tctttcttccatgcgattggtattcctgtgctttgtggttatggcatgaccgaaacaaac
gccacagtgacctgtaacaccttagacaatcgtgttgcgggatcaaacggtaaagtcttg
cccgaaatccaaattaagctgggtaaggacgacgagattttagtccgtggcgataccgtg
atgcgcggttattacaatcgccctgaagatactgctgctgcctttgaagacggctggtta
aagacgggcgatgcgggtcgactcgatgcccacggcaatttatttattaccgaccgcatt
aaagaattaatgaaaacctccaacggcaaatacattgcgccgcagcgggttgagggcaca
gtgggtcgttgcccttttatcgagcaggtggcggtgattgccgatgctcgtaactatgtg
actgcgctgattgtgccagcttttgaatctctcgaagcgtgggcgaaggaaaagggctta
aagtatgagtcgcccattgaactcttgcgtcacagccatgtggttgagcattttgaacaa
cgcttaaagcatctacagcaggaactggcaggatttgagcaaatcaaaaagtttaccctg
ctgccggaagctttttcgatggaggcggggttaatcactccgacgcttaagctgcgccgc
aaaatgatttatcacaagtacgtccatgaaataaatgctatgtacaataattga
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