Shewanella oneidensis: SO_0134
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Entry
SO_0134 CDS
T00099
Symbol
rlmF
Name
(GenBank) 23S rRNA (adenine1618-N6)-methyltransferase RlmF
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
son
Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
son03009
]
SO_0134 (rlmF)
Enzymes [BR:
son01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
SO_0134 (rlmF)
Ribosome biogenesis [BR:
son03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SO_0134 (rlmF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Methyltransf_12
Methyltransf_25
TehB
Motif
Other DBs
NCBI-ProteinID:
AAN53221
UniProt:
Q8EKF9
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All DBs
Position
141212..142309
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AA seq
365 aa
AA seq
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MPKPAIKTAAKPATSPAGKRAKPNTPQSVAKLKASTAKAASKPKAKLGEKKTLHPRNVHL
HGYDFVALMASFPKLKAFVRPTAYGALSIDFADPLAVKNLNAALLKQHYQIDFWDIPKGA
LCPPIPGRVDYVHYLADLLFEGATAPRVEQVCALDIGTGANGIYAILGQQVYGWQFVASD
INPQSLANVQRIIDNNSCLQGHVTLRRQRDENAIFKGIIEAADRFELTLCNPPFHASLRE
ASEGSQRKVRNLQLSRGEKPKATGASLNFGGQAAELWCQGGEKQFLATMIRESHMFAEQC
LWFTSLVSKQENLKPCYQALAKLGVDTVKTIEMQQGNKVTRVLAWSFHSQAKRLRWRSEL
VTPTE
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacccgccataaaaactgccgctaaacccgcgacgtcacccgcaggtaaacgt
gctaagccaaacacgcctcaatctgttgctaaactcaaagccagcacggctaaggctgct
agtaagcccaaagcaaagctcggggagaaaaagaccttacacccgcgtaatgtgcatctt
catggctatgattttgtggccttaatggcgagtttccctaagctgaaagcctttgttcgg
cctacggcctatggtgctttatcgattgattttgccgatcccttagcggttaaaaatctg
aatgcagcgttactgaaacagcattaccagattgatttttgggatattcccaaaggcgca
ctttgtccgccgatccctgggcgggtcgattatgtgcactacttggcagatctcttattt
gagggggccaccgccccgcgtgttgaacaagtctgcgccttagatattggcactggggcg
aatgggatttacgccatcctagggcagcaagtgtatggctggcagtttgtcgcttcggat
atcaatccccagtctctggccaatgtgcagcgcattatcgacaacaattcctgcttacaa
ggtcatgtaacattaaggcggcagcgggatgaaaacgccatttttaagggtattatcgag
gctgcggatcgctttgagttaaccctctgcaatccgccgtttcatgcctcattacgggag
gcgagtgaaggttcgcagcgtaaggtgcgtaacttacaactcagtcgaggagaaaaaccg
aaagccactggcgcctccttaaactttggcggtcaagcggcggagctgtggtgccagggt
ggggagaagcaatttttggccacaatgatccgcgaaagccatatgtttgctgagcaatgt
ctgtggtttaccagcttagtatcgaagcaggaaaaccttaaaccttgttatcaagcactg
gcaaaactgggtgtggatacggtaaaaaccattgagatgcagcagggtaataaggttacc
cgagtgttagcgtggagtttccattctcaggcaaagcgtttgcggtggcgcagtgagctt
gttacaccgactgaataa
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