Shewanella oneidensis: SO_0206
Help
Entry
SO_0206 CDS
T00099
Symbol
trmA
Name
(GenBank) tRNA (uracil-5-)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
son
Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
son03016
]
SO_0206 (trmA)
Enzymes [BR:
son01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
SO_0206 (trmA)
Transfer RNA biogenesis [BR:
son03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
SO_0206 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
Methyltransf_15
PrmA
Methyltransf_31
Methyltransf_11
Cons_hypoth95
TRM5-TYW2_MTfase
MTS
Methyltransf_12
DREV
Motif
Other DBs
NCBI-ProteinID:
AAN53292
UniProt:
Q8CX51
LinkDB
All DBs
Position
complement(213570..214670)
Genome browser
AA seq
366 aa
AA seq
DB search
MNLAAMDPTTYDAQLEAKRIKLEQAFAQFETPSIEVFASDPEHYRMRAEFRVWHEGDDLY
YYMFDKALNDKVRCDQYLPASTLINEMMAALIAELKPNPSLRHKLFQVDFLSTLSGEILV
SLLYHRQLDDQWRAEAIALKAKLSSQFKVNIIGRARKQKIDLDKDFVVESLQVNDKVFHY
KQIENSFTQPNAKVAIKMLEWAIDVTQNSQGDLLELYCGNGNFSIALAQNFNRVLATELA
KPSVDAAQYNIEINGIDNLQIIRMSAEEFSDAMAKKRSFRRLEGIDLDSYLCNTIFVDPP
RAGIDPATLDLVQGYERILYISCNPDTLKDNLQQLYKTHKVTRFALFDQFPYTDHMETGV
LLERIK
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagcagcaatggatcccacaacctatgatgcgcagttagaggcaaagcgtatc
aagcttgagcaagcctttgcccaatttgagacaccgagtattgaagtgtttgcctctgac
ccagagcattatcgaatgcgtgccgagtttcgcgtatggcatgaaggtgacgatttatac
tattacatgttcgataaggcattaaatgataaggttcgctgtgaccaatatctgcctgca
agcaccttaatcaatgagatgatggcggccttaattgccgagctaaaacctaaccccagt
ctgcgtcacaaactcttccaagtagattttttatctacattgagtggcgagattttagtg
tcactgctgtatcacagacagcttgatgaccaatggcgcgcagaagcaatagcacttaaa
gccaaactgagtagccaatttaaggtcaatatcatcggccgtgcccgtaagcaaaaaatc
gatttagataaagactttgtggttgagtcactgcaagtcaacgacaaagtgtttcactat
aaacaaattgagaacagcttcacccaacccaatgccaaagtagcgatcaagatgttggag
tgggcgattgatgtgactcaaaatagccaaggggatttgctcgagctgtattgtggtaat
ggcaacttctctatcgcactggcgcaaaactttaatcgcgtgttagccacagaactggcc
aagccttcagtggatgcagcacagtacaatatcgaaatcaacggcattgataatctgcaa
attattcgcatgtcagcggaagaatttagtgatgcgatggccaaaaagcgcagcttcagg
cgtttagaaggcatcgatctggatagctatctctgcaacactatttttgttgacccccca
agagctggtatcgaccctgccacattggacttagtgcaaggttatgagcggattttgtat
atctcgtgcaatcccgacaccttaaaagacaatttgcagcaattgtataagactcacaag
gtgactcgttttgcgctattcgatcagttcccttacaccgaccatatggaaacaggtgta
ctgctagagcgcattaagtaa
DBGET
integrated database retrieval system
