Shewanella oneidensis: SO_0398
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Entry
SO_0398 CDS
T00099
Symbol
frdA
Name
(GenBank) quinol:fumarate reductase FAD-binding subunit FrdA
KO
K00233
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
7.1.1.12
]
Organism
son
Shewanella oneidensis
Pathway
son00020
Citrate cycle (TCA cycle)
son00190
Oxidative phosphorylation
son00620
Pyruvate metabolism
son00650
Butanoate metabolism
son00720
Other carbon fixation pathways
son01100
Metabolic pathways
son01110
Biosynthesis of secondary metabolites
son01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SO_0398 (frdA)
00620 Pyruvate metabolism
SO_0398 (frdA)
00650 Butanoate metabolism
SO_0398 (frdA)
09102 Energy metabolism
00190 Oxidative phosphorylation
SO_0398 (frdA)
00720 Other carbon fixation pathways
SO_0398 (frdA)
Enzymes [BR:
son01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SO_0398 (frdA)
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.12 succinate dehydrogenase (electrogenic, proton-motive force generating)
SO_0398 (frdA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
FAD_oxidored
NAD_binding_8
Pyr_redox_2
DAO
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AAN53481
UniProt:
Q8EJR4
LinkDB
All DBs
Position
411381..413387
Genome browser
AA seq
668 aa
AA seq
DB search
MKLIYTDSLVVGAGLAGLRVAIASKERGLDTLVLSLIPAKRSHSAAAQGGMQASLGNAVK
GMGDDEDVHFQDTVKGSDWGCDQEVARMFAHCAPKAVRELANWGVPWSRVSAGPREVIVN
AQKVTLQEAEEAHGLINARDFGGTKKWRTCYTADGTGHSLLYAMDNKAISMDIPVHERVE
ALALIHDGERCHGVVARCLISGELRAYVAKSTTIATGGYGRIYEVSTNAIICEGIGQALA
LETGVATLGNMEAVQFHPTAIVPVGILTTEGCRGDGGLLRDKDGYRFMPDYEPEKKELAS
RDVVSRRMTEHMRKGKGVDSPYGPHLWLDITLLGRKHIETNLREVQEICENFLGIDPAKD
WIPVRPTQHYSMGGIRTKATGESPQLKGLFSVGEAACWDMHGFNRLGGNSLAETVVGGMI
IGKYIADFCENNSLEINTTLAEQFMRQVQTEIDTLVDGDGHESPFELKHAMQRIMMDYVG
IFRNGPELDKAVTELKALLERSRKLGIKCKKRHANPELVEALRVKRMLKVALTVACGAAA
RTESRGAHAREDYPQRNDRDWLNRTLASWPDANALEPVLSYEPLDVMKMELPPGYRGYGI
DNAIAHPDTAKREQQIAQILAELGEDADRYQRQAALMPFELPPSLQANNERLSDTLQKPS
ANALGEKS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactgatttataccgattcattagtggttggtgccggattggccgggctaagggta
gccattgcctctaaagagcgtggactcgataccttagtgctttcgcttattcctgctaaa
cgttctcactctgcggcggcgcaagggggaatgcaggcaagtcttggcaatgctgttaaa
ggcatgggtgatgatgaagacgtgcacttccaagacacagttaaaggatcggactggggc
tgcgatcaagaggtcgccagaatgtttgctcattgtgcgcctaaggcggtacgtgagtta
gccaactggggtgtaccttggtcacgcgtcagtgcaggtccaagggaagtgattgttaac
gcacaaaaagtcactctgcaagaagccgaagaagcccacgggttgatcaatgctcgcgat
tttggcggcaccaagaaatggcgcacctgttacaccgccgatggtacgggtcactcgttg
ctttatgcgatggataacaaagcgatttcaatggatattccggtccatgagcgcgtcgaa
gcactggcgttaatccacgatggagagcgctgtcatggggtggttgctcgctgccttatc
agtggtgaattgcgtgcttatgtggcgaaatcaaccaccatcgccaccggcggttatggc
cgcatttacgaagtgtcaaccaatgcgattatctgcgaaggtatcggtcaggcgcttgcg
ctcgaaacgggcgtggcgacgcttggtaatatggaagcggtgcaattccaccccacggca
attgtgccagttggcattttaaccactgagggttgccgtggtgatggtggtttattgcgg
gataaagacggttaccgttttatgcctgactatgagcctgaaaagaaagagctagcttcg
cgggacgtggtgtcccgccgcatgaccgagcatatgcgtaaaggtaagggcgtcgatagc
ccctatggtcctcacttgtggctggatattaccttgcttgggcgcaaacatatcgaaacc
aacctgcgtgaagtgcaagagatttgtgaaaatttcctcggtatcgatcctgcaaaggat
tggatccccgtgcgtccaacccagcattattctatgggtggcattcgcaccaaagcaacc
ggtgaaagtccgcagcttaagggtttgtttagtgtaggtgaagccgcctgttgggatatg
catggctttaaccgcttaggtggtaactcgctcgccgaaaccgtagtgggcggcatgatt
atcggcaagtatatcgctgatttttgtgaaaataacagccttgagatcaacacaacactt
gccgagcagtttatgcggcaggtgcagactgaaatcgacaccttagtcgatggcgatggt
cacgaaagccccttcgagcttaagcacgcaatgcagcggattatgatggattacgtaggg
attttccgtaatgggcctgaactcgataaagcggtgactgagcttaaagccttgcttgag
cgttcacgcaagctcggcattaagtgcaaaaaacgccacgccaatccagagttggtggag
gcgctgcgggttaagcgtatgctcaaagtcgcgctgactgttgcttgcggcgctgctgct
cgcaccgaaagccgtggtgcccatgcccgtgaagattatccgcagcgtaacgaccgcgat
tggcttaatcgcaccctcgccagttggcccgatgctaatgcgttagaacccgttttaagc
tacgagccgctggatgtgatgaagatggagttgccaccgggataccgtggttatggtatc
gacaatgccattgctcaccctgataccgctaaacgtgagcaacaaattgcgcagattttg
gcagagcttggggaggatgccgatcgttatcaacgccaagcggcgctgatgccttttgag
ctgccgcctagcctgcaagctaacaatgaacgtttaagtgataccttacaaaaaccctca
gctaatgcgttaggagaaaaatcataa
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