Shewanella oneidensis: SO_0426
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Entry
SO_0426 CDS
T00099
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase LpdA
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
son
Shewanella oneidensis
Pathway
son00010
Glycolysis / Gluconeogenesis
son00020
Citrate cycle (TCA cycle)
son00260
Glycine, serine and threonine metabolism
son00280
Valine, leucine and isoleucine degradation
son00310
Lysine degradation
son00380
Tryptophan metabolism
son00620
Pyruvate metabolism
son00630
Glyoxylate and dicarboxylate metabolism
son00640
Propanoate metabolism
son00670
One carbon pool by folate
son00785
Lipoic acid metabolism
son01100
Metabolic pathways
son01110
Biosynthesis of secondary metabolites
son01120
Microbial metabolism in diverse environments
son01200
Carbon metabolism
son01210
2-Oxocarboxylic acid metabolism
son01240
Biosynthesis of cofactors
Module
son_M00009
Citrate cycle (TCA cycle, Krebs cycle)
son_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
son_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
son_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
son_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SO_0426 (lpdA)
00020 Citrate cycle (TCA cycle)
SO_0426 (lpdA)
00620 Pyruvate metabolism
SO_0426 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
SO_0426 (lpdA)
00640 Propanoate metabolism
SO_0426 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SO_0426 (lpdA)
00280 Valine, leucine and isoleucine degradation
SO_0426 (lpdA)
00310 Lysine degradation
SO_0426 (lpdA)
00380 Tryptophan metabolism
SO_0426 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SO_0426 (lpdA)
00670 One carbon pool by folate
SO_0426 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
son04147
]
SO_0426 (lpdA)
Enzymes [BR:
son01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SO_0426 (lpdA)
Exosome [BR:
son04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SO_0426 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
AlaDh_PNT_C
GIDA
FAD_binding_2
HI0933_like
Thi4
NAD_binding_8
FAD_binding_3
DUF2226
DAO
Motif
Other DBs
NCBI-ProteinID:
AAN53508
UniProt:
Q8EJN7
LinkDB
All DBs
Position
443263..444690
Genome browser
AA seq
475 aa
AA seq
DB search
MSNEIKTQVVVLGAGPAGYSAAFRAADLGLETVIVERFSTLGGVCLNVGCIPSKALLHVA
KVIEEAKAVAAHGVVFGEPTIDLDKLRSFKQKVISQLTGGLGGMSKMRKVNVVNGFGKFS
GPNSLEVTAEDGTVTVVKFDQAIIAAGSRPIKLPFIPHEDPRIWDSTDALELKEVPGKLL
VMGGGIIGLEMGTVYSSLGSEIDVVEMFDQVIPAADKDVVRVFTKQIKKKFNLILETKVT
AVEAREDGIYVSMEGKSAPAEPVRYDAVLVAIGRTPNGKLIDAEKAGVKIDERGFINVDK
QLRTNVPHIYAIGDIVGQPMLAHKGVHEGHVAAEVIAGMKHYFDPKVIPSIAYTDPEVAW
VGLTEKEAKEQGIAYETATFPWAASGRAIASDCSEGMTKLIFDKDTHRVIGGAIVGVNGG
ELLGEIGLAIEMGCDAEDLALTIHAHPTLHESVGLAAEIYEGSITDLPNPKAKKK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgaaatcaaaactcaggtagtggtattaggagcgggtcctgctggatattct
gcggccttccgtgcggcggatttaggcttggaaaccgttatcgttgaacgttttagcact
ttaggtggtgtgtgtctgaacgtgggttgtatcccatctaaagccctgttacacgttgct
aaagtgatcgaagaagccaaagccgttgctgcacacggtgtggttttcggcgagccaacc
atcgatttagacaagttacgcagcttcaagcaaaaagtaatcagccagttgactggtggc
ttaggcggcatgtctaaaatgcggaaagttaacgttgttaatggcttcggtaaattctct
ggccctaacagcctagaagtgactgcagaagacggcactgtgacggttgttaagtttgac
caagcgatcatcgctgcgggttctcgcccaattaaactgccatttattccccatgaagac
ccacgtatttgggattcgaccgacgcattagaactgaaagaagtccctggcaaattgttg
gtaatgggcggtggtattatcggtttagaaatgggtacggtttactcttctctgggcagt
gaaatcgacgtggttgaaatgttcgaccaagtgatccctgcggctgacaaagacgttgtt
cgcgtattcactaagcaaatcaagaagaaattcaacctgatcctcgaaactaaagtcaca
gcggttgaagcccgtgaagacggtatttacgtttctatggaaggtaagagcgcgccagct
gagcctgtacgttacgatgcggtattagtcgccatcggccgtacgccaaatggcaagctg
atcgacgctgaaaaagcgggcgttaagattgatgagcgtggtttcatcaacgtagacaag
caattacgtactaacgtaccgcacatctacgccatcggtgacatcgttggtcaaccaatg
ttggctcataaaggtgtgcatgaaggccacgtcgcggccgaagttatcgcgggcatgaag
cattacttcgatccaaaagttatcccatcaatcgcttacacagaccctgaagtggcctgg
gttggtctgacagagaaagaagcgaaagagcaaggtattgcttacgaaactgctactttc
ccatgggcagctagtggtcgtgctattgcgtcagattgctctgaaggtatgactaagctg
attttcgataaagatactcaccgcgttatcggtggtgctatcgtcggtgtaaacggtggc
gaactgttaggcgaaatcggtctggcaatcgaaatgggttgtgatgctgaagatttagca
ttaacgattcacgctcacccaacgctacatgagtctgttggtttagcggctgaaatctac
gaaggctcgattactgacttgccaaacccaaaggcaaagaaaaagtaa
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