Shewanella oneidensis: SO_0478
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Entry
SO_0478 CDS
T00099
Symbol
sirE
Name
(GenBank) cytochrome c maturation system haem lyase subunit SirE
KO
K02198
cytochrome c-type biogenesis protein CcmF
Organism
son
Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
son02000
]
SO_0478 (sirE)
Transporters [BR:
son02000
]
Other transporters
Others
SO_0478 (sirE)
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Gene cluster
GFIT
Motif
Pfam:
CcmF_C
Cytochrom_C_asm
Motif
Other DBs
NCBI-ProteinID:
AAN53559
UniProt:
Q8EJI7
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All DBs
Position
complement(500072..502138)
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AA seq
688 aa
AA seq
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MINMIPEIGHILLIMSTVFALLSAASHLIGSYQRNLYLIAFGNRLFYALFFTLLTALCSL
VFSFIADDFSVAYVANHSNSQLALGYKVAAVWGSHEGSMLFWVFAIALWGAVINWRQATH
SAKLDLENLQADKAYFGRVLAILALVILGFNLFLLFTSNPFARLLPNIPVEGRDLNPILQ
DIGLILHPPMLFLGYVGLTVCFAAALASLIGGKLPARHLDYLRPWVLLAWIFLTGGNAFG
SWWAYNELGWGGWWFWDPVENASFIPWLVATALVHSLVLTRKTQGFTLTTLFLCLLAFSL
SLLGSFLVRSGIVQSVHAFAADPTRGMSILSLLVIFVGAALLIFALKANLLRREIDFGLY
SKETLLLLGIVILVVAAFSVLLGTFYPLIYELLNLGTLSVGAPYFNAIFVPLTFLVVLLM
GIAPLVEWQNTSKAQAMPILLFGFGVLAIAFWVSLQAASGSNLFLLLGTAAALWLIVCLL
LTLLVSLSVRKRASTNQITANAPVKSRTSKQRFIGMMLAHLGVAITIIGASAVSNFEEEA
LLRMGPGQGKPLAGYILVYESTENVETNSFTAIQANISIRDGANDEEILGYVRPQRQTFK
SNAMEMSHAGIDHGFWRDIYVSMGVQLSDSEYLIRISYKPLATWIWLGALFMMLGGAIAA
WPVRQARRVEQSEQLSTSSSSARETVTQ
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgataaatatgattccagaaatcgggcacatattgctgatcatgagtactgtgtttgca
ttattgtcggcggccagtcatttaatcggtagttaccagcgcaacctttatttaattgca
tttggcaatagattattttacgcgttatttttcaccttattaaccgcgttatgtagctta
gtttttagctttattgccgatgacttttcagtcgcctatgttgccaatcattccaacagc
caactcgccctcggttataaagtcgctgcggtgtggggcagccatgaaggctcaatgctg
ttttgggtatttgccattgccctatggggtgcagtgatcaattggcgccaagcaacccat
agcgccaaactcgatctggaaaacttacaagcagataaggcttactttggtcgggtactc
gctattttggccttagtgatcctcggttttaatttgtttttactctttacttccaatccc
tttgctcgcttgctaccgaacattccagtcgaagggcgcgaccttaaccccatattgcag
gacattggcttaatactgcatccacctatgctgtttttgggttatgtcgggctaacggtt
tgctttgccgcagcgctggcatcactgattgggggcaagttacctgctcgccacctcgat
tatttacgtccttgggtgctactggcgtggattttcctcacaggtggtaatgcctttggc
tcttggtgggcctacaacgaactgggttggggtggttggtggttttgggaccccgttgaa
aacgcctcttttattccttggttggttgcaacagcgctggtgcattccttagtactcacc
cgaaaaacccagggatttaccctcaccaccctgtttttatgtttattggccttctccctc
agtctgttaggcagctttttagtgcgttcaggcatagtgcaatcggtgcatgcctttgcc
gcagatccaacccgcggtatgtctattctcagtttgctggtgatttttgttggcgctgca
ttattaatttttgcgctcaaggccaatctattaaggcgtgaaatcgactttggtctgtac
agtaaggaaacgctattactgctcgggatagtgattttagtggttgccgccttttcagtg
ttgcttggcactttttacccgctgatttatgaactcctcaacctaggtacactttcagtc
ggggcgccgtacttcaacgccatatttgtaccattgacctttttagtcgtactactgatg
gggattgcccccctcgtcgaatggcaaaatacctctaaggctcaagctatgccgatattg
ctgttcggctttggggtattggctatcgccttttgggtaagtctacaggcggcgtctggc
agcaacttattcttactgcttggcacggcggcagccttatggcttatcgtgtgcttatta
ctgacgctgttagtgagtcttagtgttcgcaaacgcgccagtacaaaccaaattacagcc
aacgcgcccgtaaaatcccgcacctcaaaacaacgctttatcggcatgatgctcgcccac
ctcggggttgccatcaccattattggtgcctcagcggtatccaattttgaagaagaagca
ctgctcagaatgggcccaggccaaggtaagccgttagcgggttatatcttagtgtatgaa
agcactgagaatgtcgaaaccaatagctttacggcaatccaagccaatatcagtatccgc
gatggcgcgaatgatgaagagatcctcggttatgtaaggccgcaacgacaaacttttaaa
agcaacgcgatggaaatgtcccacgcggggatcgaccacggtttttggcgggatatttat
gtctcaatgggcgtgcaattaagtgacagcgaatatctgatccgtattagctataaacca
ctggccacttggatttggctgggggcacttttcatgatgctcggcggcgccattgccgcg
tggcccgtaaggcaagctcgccgcgtcgaacaatcagaacagctcagtacaagctcatca
tctgcaagggagacggtaacccaatga
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