Shewanella oneidensis: SO_0506
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Entry
SO_0506 CDS
T00099
Symbol
ubiD
Name
(GenBank) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
son
Shewanella oneidensis
Pathway
son00130
Ubiquinone and other terpenoid-quinone biosynthesis
son01100
Metabolic pathways
son01110
Biosynthesis of secondary metabolites
son01240
Biosynthesis of cofactors
Module
son_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
son_M00989
Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
SO_0506 (ubiD)
Enzymes [BR:
son01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
SO_0506 (ubiD)
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GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
AAN53587
UniProt:
Q8EJG1
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All DBs
Position
complement(532474..533940)
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AA seq
488 aa
AA seq
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MSFKDLRSFIDHLEANGELKRISYPVDPHLEMTEIADRVLRAQGPALLFENPTNHSMPVL
ANLFGTPKRVAMALGKDDPLALREVGELLAFLKEPEPPRGFKDAISKIPMFKQALNMPPK
TVRNPACQQVVKTGDDVDLTQLPIQHCWPGDVAPLVTWGLTITKGPRKSRQNLGIYRQQL
LGKNKLIMRWLSHRGGALDFADFKEQFPGERYPVVVALGSDPVTILGAVTPVPDAMSEYA
FAGLLRGERTEVCKALSCDLEVPASSEIILEGYIDPNEMAEEGPYGDHTGYYNETDKFPV
FTVTHITHRKDPIYHSTYTGRPPDEPAMLGVALNEVFVPILRKQYPEIIDFYLPPEGCSY
RMAVISIRKQYPGHAKRVMMGAWSFLRQFMYTKFIVVVDDDVNCRDWNDVIWAITTRMDP
KRDTVMIDNTPIDYLDFASPVVGLGSKMGLDATNKWEGETNREWGTPIVMDPKVKQKIDS
IWDELGIS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaggatttacgcagctttattgatcatctggaagccaatggcgaactcaaa
cgcattagctaccccgttgatcctcatttagaaatgacagagatcgccgatcgcgttctg
cgcgcccaaggccctgcacttctgttcgaaaatcccaccaatcactccatgccagtactg
gccaacctatttggtacacccaaacgcgttgccatggcgctgggtaaagatgatccgtta
gcgctacgcgaagtcggtgagctattggcgtttttaaaagaacccgagccaccacgcggt
tttaaagatgcgatttcaaaaatccctatgttcaagcaagccttgaatatgccgcccaag
actgtacgtaatcctgcctgtcagcaagtggttaaaaccggtgatgatgttgatttaacc
cagttaccgattcagcattgctggccaggcgatgtggcgccgctggtcacatggggctta
accatcaccaaagggccgcgtaagagccgccaaaacttaggcatctaccgtcagcaattg
cttggtaagaataaactcattatgcgttggctctcccaccgtggtggcgcgctcgacttt
gctgattttaaagaacaattccccggcgaacgttaccctgtggttgttgccttaggctcc
gatccagtaaccattttaggcgcagtcaccccagtgcctgatgctatgagcgaatacgcc
tttgcgggactactgcgcggcgagcgcaccgaagtctgcaaagccttaagctgcgattta
gaagtgccagccagcagcgagattatcctcgaaggttatattgaccctaacgaaatggcc
gaagaaggcccctacggcgaccacactggttactacaacgagacggataaattccctgtc
tttaccgtgactcatattactcaccgtaaagatccgatttaccacagcacctatactggc
cgtccaccggatgaacccgccatgcttggggtcgcattaaacgaagtgtttgtgccaatc
ttgcgtaagcaataccctgaaattattgatttttatcttccgcctgagggttgttcgtac
cggatggcggtgatctccattcgcaaacaatatcccggccacgctaaacgggtgatgatg
ggcgcttggtccttcctgcgccagtttatgtataccaaatttattgtggtggttgatgac
gatgtcaattgtcgcgactggaacgatgtgatttgggccattaccacccgtatggaccct
aaacgcgatacggtgatgatcgataacacccctatcgattacctcgattttgcctcccct
gtagtgggcttaggttcaaaaatgggtctcgatgccaccaataagtgggaaggcgaaacc
aaccgcgaatggggcaccccgatagtaatggaccctaaggttaaacaaaaaatcgactca
atttgggatgagttagggatatcgtaa
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