Shewanella oneidensis: SO_0600
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Entry
SO_0600 CDS
T00099
Symbol
amiB
Name
(GenBank) N-acetylmuramoyl-L-alanine amidase AmiB
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
son
Shewanella oneidensis
Pathway
son01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
son00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SO_0600 (amiB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
son01011
]
SO_0600 (amiB)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
son03036
]
SO_0600 (amiB)
Enzymes [BR:
son01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
SO_0600 (amiB)
Peptidoglycan biosynthesis and degradation proteins [BR:
son01011
]
Peptidoglycan biosynthesis and degradation
Amidase
SO_0600 (amiB)
Chromosome and associated proteins [BR:
son03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SO_0600 (amiB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
AMIN
LysM
LysM3_LYK4_5
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
AAN53678
UniProt:
Q8EJ71
LinkDB
All DBs
Position
625445..626836
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AA seq
463 aa
AA seq
DB search
MTKNKHYFQGIILLLCTFFAVAAQAANQLESVRIWAAPESTRIVFDLSEVPNYSYFTLDG
PNRLVVDLKKASTKLNLKNVDNNSKLVKGIRVSKSPTKGDLRLVIDLVKPLNPNLFSLPV
TAPYGNRLVVDLEDKSATAELSAVSSTPVKKNVTQSVQASRDIVIAIDAGHGGDDPGSIG
PSGLYEKKVVFEISKRLASKINDTPGMRAVMIRSGDYFVNLNRRSELARNSKADLLISIH
ADAFTSPNPRGASVWVLSMRRANSEIGRWLEQKEKHSELLGGAGEIIQNTDNEQYLAMTL
LDMSMNSSMAIGHSVAGDILKDLGAVTELHKSRPESASFAVLKSPDIPSILVETGFISNP
KEERLLSSSRHQESIATAIYKGVNRYFHNNPPADTLLAKKNTTGSTVKSSSKSAGTIKHK
VSRGESLSAIAQRYKVPMASIIRANGMKTDVVQLGQTLVIPES
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaataagcattactttcaaggtattattcttttactgtgcacattttttgct
gtggcggcccaagcggcaaaccagctcgaaagtgtgcgcatttgggctgcacccgagtcg
acgcgaatcgtgttcgatttgagcgaagtacccaattacagctactttaccctcgatgga
cctaatcgtttagtggtcgacctaaaaaaggcatcgacgaaactgaatctgaaaaatgtt
gataacaacagtaagttagttaaagggattcgggtcagtaaatcccccacgaaaggggat
ttacgactggttatcgatttggttaagccattaaatccaaatttgttttcgctgcccgtg
acggcaccttatggcaatcgtctagtggtcgacttagaggataaaagcgccactgcagag
ctatcggccgtgagttcaactccagtcaaaaaaaatgtgactcaaagcgttcaagcttct
cgagatattgtgattgctattgatgctggacatggtggtgacgatccggggtcgattggg
ccatctggtctctatgagaaaaaagtagtatttgaaatttcaaagcgccttgccagtaaa
attaacgacaccccaggaatgcgtgccgtgatgatccgtagtggtgactactttgttaac
ttaaaccggcgctctgagcttgcccgcaatagtaaggccgacctactgatttctatccat
gcggatgctttcacatcgcccaatcctcgcggggcgtccgtgtgggtattatcgatgcgc
cgtgcaaacagtgaaattggtcgttggttagagcaaaaagagaaacactcagaattgttg
ggtggtgcaggggaaattattcaaaatactgataatgaacagtatcttgcaatgacctta
ctcgatatgtcgatgaacagctctatggccattggtcactcggttgctggggatatttta
aaagatttaggtgctgtgactgagctgcataagagccgcccagaatcggcaagttttgcg
gtattgaaatcccctgatattccttcaattctagtggaaacagggtttatctcgaatcct
aaggaagagcgtttgctgagcagcagccgtcatcaagaaagcattgccaccgcaatttat
aagggtgttaaccgttatttccataataatccgccagcagatacgctattagcgaagaaa
aataccactggctcaactgttaaatccagtagcaaatctgctggtaccatcaaacataag
gtgagccgcggtgagtcgctttctgcaatagcccagcgttataaagtccctatggccagt
attattcgcgccaatggcatgaagaccgatgttgttcagcttgggcaaacactcgtgatt
cctgagagttaa
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