Shewanella oneidensis: SO_0704
Help
Entry
SO_0704 CDS
T00099
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
son
Shewanella oneidensis
Pathway
son03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
son00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SO_0704 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
son03019
]
SO_0704 (groEL)
03110 Chaperones and folding catalysts [BR:
son03110
]
SO_0704 (groEL)
03029 Mitochondrial biogenesis [BR:
son03029
]
SO_0704 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
son04147
]
SO_0704 (groEL)
Enzymes [BR:
son01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SO_0704 (groEL)
Messenger RNA biogenesis [BR:
son03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SO_0704 (groEL)
Chaperones and folding catalysts [BR:
son03110
]
Heat shock proteins
HSP60 / Chaperonin
SO_0704 (groEL)
Mitochondrial biogenesis [BR:
son03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SO_0704 (groEL)
Exosome [BR:
son04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SO_0704 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
SO_0704 (groEL)
Exosomal proteins of breast cancer cells
SO_0704 (groEL)
Exosomal proteins of colorectal cancer cells
SO_0704 (groEL)
Exosomal proteins of bladder cancer cells
SO_0704 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AAN53782
UniProt:
Q8CX48
LinkDB
All DBs
Position
721019..722656
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKEVVFGNDARVKMLAGVNILANAVKVTLGPKGRNVVLDKSFGSPLITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDLKRGI
DKAVIAAVAELKNLSQDCADSKAIAQVGTISANSDESIGQIIATAMEKVGKEGVITVEEG
QALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGL
AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTV
IAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDY
DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALI
RVASKIADVEVANEDQKHGVVIALRAMEAPLRQIATNAGEEASVVANNVKNGSGNYGYNA
GNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAMVAELPKADAPDMGGMGGMGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagttgtatttggtaacgacgcacgcgtaaaaatgctggctggtgta
aacattctggctaacgcagtaaaagtgaccttaggccctaaaggccgtaacgtggtatta
gacaagagctttggctcaccactgatcactaaagacggtgtgtctgttgcaaaagaaatc
gaattagaagacaaattcgaaaacatgggcgcgcaaatggtgaaagaagttgcttctaaa
gccaacgacgccgccggtgacggtaccactactgcaactgttctggcacaagccattgta
actgaaggcttaaaagccgttgcagcgggtatgaacccaatggacttaaagcgcggtatc
gataaagccgtgattgccgccgttgctgaactgaaaaacctgtctcaagattgcgctgac
tcaaaagcgatcgctcaagttggtactatctctgcaaactctgacgagtcaatcggccaa
atcattgccactgcaatggaaaaagtcggcaaagaaggcgtgatcaccgttgaagaaggc
caagcactggaaaacgaactggacgtagtagaaggtatgcagttcgaccgtggctacctg
tctccatacttcatcaacaagccagaaaccggcagcgttgaattagatcacccattcgta
ctgttagtagacaagaaaatctctaacattcgcgaactgttacctatccttgaaggtctg
gcaaaaaccggtaagccattactgatcgttgccgaagacgttgaaggtgaagccttagca
acgctcgttgttaacaacatgcgcggtatcgtgaaagtggcagcggttaaagccccaggc
tttggtgaccgtcgtaaagccatgctgcaagacgtagcgattttaactggcggtactgtt
atcgctgaagaaatcggcctagagcttgaaaaagcaaccctagaagatttaggtactgct
aagcgtgttgttatcactaaagacaacaccaccatcatcgatggtaacggcgaacaagcg
caaatcgaagcgcgcgtaagccaaatcaagcaacaaatcgaagaatcaacttcagactac
gacaaagaaaaactgcaagagcgtatggctaaattagctggcggtgttgcggtaattaaa
gtcggtgcagcgaccgaagttgaaatgaaagagaaaaaagctcgcgtagaagacgcactg
cacgcaacccgtgctgcggttgaagaaggcgtggtacctggcggcggtgtagcacttata
cgtgttgcctctaagattgctgacgttgaagtggctaacgaagaccaaaaacacggtgtg
gttatcgccttacgtgcaatggaagcgccactgcgtcaaatcgcgaccaacgcaggcgaa
gaagcctctgttgtggctaacaacgtgaaaaacggcagcggtaactacggttacaacgcg
ggcaacgacacctacggtgacatgttagaaatgggtatccttgacccaactaaagtgacc
cgtagcgcactgcaattcgcagcgtctatcgcaggcctgatgatcaccaccgaagcaatg
gtcgctgagctgccaaaagctgatgcgccagatatgggcggaatgggtggtatgggcgga
atgggcggcatgatgtga
DBGET
integrated database retrieval system
