Shewanella oneidensis: SO_0754
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Entry
SO_0754 CDS
T00099
Symbol
atmA
Name
(GenBank) ABC-type Ni2+/Co2+ export system bifunctional ATPase and permease components AtmA
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
son
Shewanella oneidensis
Pathway
son02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
son00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SO_0754 (atmA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
son02000
]
SO_0754 (atmA)
Transporters [BR:
son02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SO_0754 (atmA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
AAA_21
AAA_29
RsgA_GTPase
DUF815
AAA_10
Zeta_toxin
MMR_HSR1
Septin
ABC_ATPase
DUF87
AAA_24
AAA_15
DLIC
Motif
Other DBs
NCBI-ProteinID:
AAN53830
UniProt:
Q8EIT1
LinkDB
All DBs
Position
complement(769396..771186)
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AA seq
596 aa
AA seq
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MRPTLYFEGPIDKLNWHVIKLLWPYLLEYKGRVALAMSCLIVAKLASVGLPFILKDVVDT
LDANKTAQTLSVPIGLVLAYGAVRLLTVITGEIRDTLFGRVTERAIRRLGLAVFDHLHRL
DLDFHLERRTGGLSRDIERGTSGVSFLMRFMVFNIVPTLLEIAMVIGIFFFNYGVAFASI
TFISVLAYIWFSVIATEWRTEYVRDAAKADSLSNTRAIDSLLNYETVKYFNNEKYESERY
DQALDQWEVAKRKNRLSLFALNGGQALIIAIAMTAMMALAAYKVTHNEMTLGDFVLINAF
MMQLFMPLNFLGFVYREIRGALANIERMFSLLDKHPSIVDKPDALDFEPKRGELSFENVS
FSYDDRPILRNVSFKVAAGKKVAVVGDSGAGKSTLIKLLFRFYDVEQGRILIDGQDIRQL
TQDALRRAIAIVPQDTVLFNDSLVENIRYGRPNASDDDVRHAIKLAHLEDFIASLSQGWD
TKVGERGLKLSGGEKQRVAIARAILKGSPVLVFDEATSSLDSRSEQAILSALREVAKGHT
SLVVAHRLSTIVDADQIVVLSKGEIVEQGNHSSLLAQDGLYAKLWRIQNEQQHLSV
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccaacactgtattttgaaggtcccatcgataagctcaattggcatgtgattaag
ttactttggccctatttgcttgaatataaagggcgggtggcattagccatgtcttgcctt
atcgtcgctaagctcgccagtgtgggtttaccttttattcttaaagacgtcgtcgatact
ttagatgccaataaaacagcgcagacgttgagtgttcccataggattagtgctggcctat
ggcgccgtccgcctgctgacggttatcacgggggaaatccgcgacaccctatttggccga
gtgacggagcgcgccattcgtcgtttaggtctggcggtgttcgaccacttgcatcgactt
gatttggattttcaccttgagcgccgaaccggtggtttatcgcgggatattgaacgcggc
accagtggggtgagttttttgatgcggtttatggtatttaacatagtgccaaccctgtta
gaaatcgccatggtgatcggcattttcttttttaattatggtgttgcgtttgcatctatc
acttttatctctgtgctagcctatatttggttttcggtcattgccactgagtggcgcacc
gaatatgtccgtgatgcagctaaagctgactccctctccaatacccgcgcgattgatagc
ctactgaactatgaaaccgtgaagtattttaataatgagaaatatgaatcggaaagatac
gatcaagccctagaccaatgggaagtcgcgaagcgtaaaaatcgtttatcgctttttgcc
cttaatggtggtcaggcgttaattattgctatagcgatgacagcgatgatggcattagca
gcctataaagtcacccataatgagatgaccttaggggactttgtactgataaacgctttt
atgatgcagctgtttatgcctctgaattttttaggttttgtctatcgcgaaatccgtggc
gcacttgccaatatcgaacgtatgtttagcctgctggataagcaccccagcatagtcgat
aaacccgatgcattggattttgaacctaagcgaggcgagctcagttttgagaatgtgagt
tttagctacgatgataggcccatattgcgtaatgttagttttaaggttgcggcgggtaaa
aaggtggccgtagttggggatagcggcgcaggaaaatccacattaatcaagctattgttc
cgtttttacgatgtagaacaagggcgtattttgattgatgggcaagatattcgccagtta
acccaagatgcgctacgcagggctattgcaatagtgccgcaagatactgtgttatttaat
gattctttagttgagaacatacgctatggccgccccaatgcaagtgatgacgatgtgcgt
catgccattaaacttgctcatttagaggattttatcgcatcactttcacaagggtgggat
accaaagtgggcgagcggggattaaaactgtcaggtggcgaaaaacaacgagttgcgatt
gctcgagcaatcttaaaaggctccccagtgttagtgtttgatgaggcgacctcatcccta
gacagccgctccgagcaggcgattttatcagccttgcgtgaggtggctaaagggcatact
agcttagtcgtagcacatagattgtcgactattgtcgatgctgatcaaatcgttgtttta
agcaaaggggaaattgtcgagcaggggaatcactcttcgttattagcgcaggatggtctt
tatgccaaattgtggcgcatacaaaatgagcaacaacacctttcggtgtaa
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