Shewanella oneidensis: SO_0850
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Entry
SO_0850 CDS
T00099
Name
(GenBank) type IV pilin-associated adhesin
Organism
son
Shewanella oneidensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7305
pAdhesive_15
Bactofilin
PilX_N
Motif
Other DBs
NCBI-ProteinID:
AAN53926
UniProt:
Q8EII9
LinkDB
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Position
complement(872300..873928)
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AA seq
542 aa
AA seq
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MDKLRPAIGNKEHGAVLLIVLVFSLLASLLVVTSLRDNLVQERLSGNFQKQINAQLLAEQ
GMHESYNQLKNQLKQTPNQSLQTLYDQLPTNANGSLEGSSYALDNGKITGAELSLDSRGQ
HLEGQAKLNAQFTLQASKGNTIFNDAIVSCESLNLTGSSSIDGYDSRKGAYGDSISNGQG
GSQRNQHGKGNVTTIEPNANITLTGNAPIYGDVSATGSVTLSGSSSLSGSIQANNDVTLG
TGTVSGNIAAGNNFKLANSGKVEGSVKANNNASTAPSAQINGTLQYGGEGNFHQNSQIGN
LVNTRPNLPPVPTKSCDPLDISAVMGGFKMPNNGARRIDSNANVTITPTGSSKTELSWKG
DYFPSLTPTAETIFGTETPVFNLDSLVMSADGVLNISGGDVTLIVNGDFKMSGSNQLNVA
PGSSLTLLFVNGEISFTAGANNGNNIKAQTLTDTHKPPVSIFSGSDKDVTVSGNVPIYAA
LYAPKSKVNLQGGPEIFGSVRGKAITATGNGKIHYDNALGSADLGEDHALPAVVLLKQWQ
YL
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggataagctaagacccgctatcggcaataaggaacacggcgccgtattactcattgtc
ttagtcttcagcttgttagctagcttgttggtcgtgacgtcacttagggataatctcgtt
caagagcggctgagtggtaattttcaaaaacagatcaatgcacagctgttagcagaacag
ggcatgcatgagagctacaatcagctcaaaaaccagctcaaacaaacacccaatcaaagc
ttgcagacgctttatgatcagctcccaactaacgctaatggtagcctcgaaggcagtagc
tatgccctcgacaacggaaaaataaccggagccgaactcagcctcgatagtcgtggtcag
catttagaaggccaagctaagctcaatgcgcaattcaccctgcaggccagcaagggcaat
accatctttaatgacgcaattgtttcctgcgagagtttaaatttaaccggcagtagtagt
atcgatggttacgattcccgtaaaggcgcctacggcgatagcatcagtaacggacagggt
ggtagccaacggaatcaacatggcaaaggcaatgtgaccaccatagagcccaatgccaat
atcacgctcacgggtaacgcacccatttatggcgatgttagcgccacgggcagcgtcacc
ctctcaggatcatcgagcctcagtggcagtattcaagcaaataacgatgtcacgctcggt
acaggaaccgtcagtggcaatatcgcggcgggcaataacttcaagttagccaacagcggc
aaggtcgaaggatcggtaaaagccaacaataatgcctcaacggcacctagcgcccagatc
aatggcacactgcaatatggtggcgaagggaacttccatcaaaacagccagattggcaac
ctagtcaacactcgccccaatttgcctccagtaccaaccaaatcctgcgatccattagat
atcagcgcagtaatgggtgggtttaaaatgcctaataatggcgcgcgcaggatagattcc
aatgccaatgtcactattacgccgacagggtcaagcaagacggaacttagctggaaaggg
gattatttccccagcctaacaccgaccgcagaaacgatttttggcactgaaacccccgtg
tttaatctcgatagtttagtcatgagcgccgatggagtactgaatattagcggtggcgac
gttaccctaatcgttaatggtgactttaaaatgagtggctcgaatcaactcaatgttgcc
ccaggttctagccttactttattatttgttaacggtgaaatatccttcactgcaggagcc
aacaacggcaataacataaaagcccaaacactgaccgacacccataaaccaccagtgtca
attttttccggttcagataaagatgtcaccgtcagcggtaatgtgccaatttatgccgcg
ctctacgcgcccaaatctaaggtaaacctccagggtggcccagaaatattcggttccgtt
agaggcaaagccatcacagcaactggtaatggaaaaatccattatgacaatgcgttaggc
tcagccgacttaggtgaagaccatgcactgccggccgtggttctattaaaacagtggcaa
tatttataa
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