Shewanella oneidensis: SO_0988
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Entry
SO_0988 CDS
T00099
Name
(GenBank) molybdopterin-binding oxidoreductase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
son
Shewanella oneidensis
Pathway
son00630
Glyoxylate and dicarboxylate metabolism
son00680
Methane metabolism
son01100
Metabolic pathways
son01120
Microbial metabolism in diverse environments
son01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SO_0988
09102 Energy metabolism
00680 Methane metabolism
SO_0988
Enzymes [BR:
son01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
SO_0988
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Fer2_4
Pyr_redox_3
NAD_binding_8
Fer4_7
Fer4
DAO
HI0933_like
Fer4_8
Fer4_6
NAD_binding_7
Fer4_10
Thi4
Amino_oxidase
FAD_oxidored
Fer4_16
Fer4_2
Fer4_18
FAD_binding_2
FAD_binding_3
Fer4_9
Fer4_21
Lys_Orn_oxgnase
NADH-G_4Fe-4S_3
AlaDh_PNT_C
Fer4_22
Shikimate_DH
Fer4_15
MCRA
Motif
Other DBs
NCBI-ProteinID:
AAN54062
UniProt:
Q8EI61
LinkDB
All DBs
Position
complement(1016861..1021147)
Genome browser
AA seq
1428 aa
AA seq
DB search
MIELRIDNKIVSAEPSDNLLHAARKAGIAIPSLCDPTDASRQLDTQAHAEKQDCNLCLVQ
IENSDASLRCVKACETPAQTGMKVITQSAFLTKQRQAALNAILSDHFADCEAPCQQACPA
GVDVQRYLYHIAQGDHTQAVKVIKETLPLPLSIGRVCPAFCETECRRGLIDDPIAIRQLK
RHAADLDLADDEHGNSYQPPRLADTGKKIAIIGSGPAGLSAGYYLSNQGHNIEIFEAMPK
AGGWLRYGIPEYRLPKAILDKEIELLCRNGLTIHTQMRLGHEIHLNQLITDFDAVCLAIG
AQKAVPMHYKGSELAGCYLGVDFLKDHCLDKQLKLGKKVAVIGGGNTAIDCARTAVREGC
DVTLIYRRTRAEMPAEAYEVHEAEVEGVKFHFLTNPLENHSDADGRVQSVTFSKMTLGEA
DASGRRAPVDTGETFTEAFDTVIAAVSQAPDLSFMQDPKGQLSHGELALSRWNTLMGCEQ
TMSSGVEKLFVMGDARRGPATAVAAIGDGRKAAKAIDKMLQIGLSCDLHAHEFNSVKTIP
GSLKQAEVKSAEASSPLYPHTKRQPRLKMPELTALQRLLNYSEVELGFPADAAMQEAARC
LECACQANTDCKLRDYATDYGVESKSLATENARYFSVDKSSPFIQFDANRCISCGKCVDV
CQQQSGHCAIQFAKDSYQVLPQSISPADERRAPRVGFSASMADSHCVQCGNCVQVCPTGA
LVDARDKRQGDCTELTTASTICTYCGVGCRLDLKIDPSTNRIRHIEGNKDSVVNQGMLCV
KGRFGFDFIHSDKRLTTPLIRKNGKLQPCSWPEAIDYVAKRLTEIKQKDGSNAFASLASA
KATNEDNFVLQKFVRSVLGTNNIDHCARLCHSSTVTGLQQSIGSGAMTNDILSIKDSDVI
FILGSDTTCAHPIIASKIQQAVNLYGARLIVADPKRVGIAEKAELYVAHRPGTDVMLLNA
IMAEIIRNNWQDKDYIAKRTEGIEALYAELAKEDYSLEKAALITGVKAENIARIARTIGT
AQKTAVYYAMGITQHTTGHDNVTAISNLQLLCGNIGVSGAGINPLRGQSNVQGACDMGAL
PNYFTGYQKVTDIHARMRFESHWQTPLSGEIGVTATHMMHDIAKGKINALYVMGENPVLS
DPDQAHVLNALSQIEFLVVQDIFLTETAELAHVVLPAAAFVEKRGHFTNTERRVQRLEQA
LASPGEALPDWQIVQAIANAMGANWDYKDEAAIWAEINALTPQYRGILWERLTAGEDGQI
PQGIQWPCPDEKHPGTPIMHQGQFTRGLGLFTPVSYRLPAEMPCNEYPLTLSTGRLLEQF
HTGTLTRKTPGLDLLGAPKVMISVYDAEQLGINNGDKIRLTTRRGEIEIDAFVTKRAQAG
VLFLPFHFVEAAANKLTINALDPVAYIPEYKVCAVRVEKVTKQMCEPT
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgatagaacttcgaatcgacaataagatagtctcggccgaaccgagcgataacctatta
cacgcagcccgtaaggcgggtattgctattcccagcctgtgcgatcccactgacgcctca
cggcaattggacacgcaagcccatgccgaaaagcaggactgtaacctctgtctggtgcaa
atcgaaaatagcgatgccagcctacgctgtgttaaagcctgtgaaaccccagcccaaaca
ggcatgaaggtcatcacccaatcggcgtttttaaccaaacaacgccaagcagcactgaac
gctattttgagcgatcactttgccgactgtgaggcgccctgccaacaagcctgcccagcg
ggtgttgatgtgcagcgttatctgtaccacattgcccaaggtgaccacactcaagcggtt
aaagtcattaaagaaacattgccactgccactgtcgattggccgagtttgccccgcgttt
tgcgaaaccgaatgccgccgcggcctcatcgacgacccgattgccatccgccaacttaag
cgccatgccgccgatttagatttagccgatgacgagcacggcaatagttatcaaccgcca
cgcctcgcagacactggcaagaaaattgcgattattggctctggcccagcgggcttaagc
gcgggttattacctgtctaaccaagggcataatattgagatttttgaggccatgcccaag
gccggtggttggctgcgctacggtattcccgaataccgtttacccaaagcgattctcgat
aaagaaattgagttgctgtgtcgtaatgggttaaccattcatacccaaatgcgcctaggt
catgagatccatttaaaccagctgatcaccgattttgatgcagtgtgccttgccatcggc
gcccaaaaagcagtgccaatgcactataaaggctccgagcttgctggctgctatcttggg
gtggattttcttaaggatcattgcctcgataagcaattgaagcttggtaaaaaagtggcg
gtaattggcggcggcaacaccgccatagattgtgctcgcacagcggtgcgcgaaggctgc
gatgtcaccttaatctaccgccgtacccgcgccgaaatgcccgctgaagcctacgaagtg
cacgaggccgaagttgaaggggttaagtttcacttcttaaccaatccacttgaaaaccat
agtgatgccgacggtcgagtgcagtcggtcacctttagcaaaatgacgctcggcgaagcc
gatgcctcgggcagacgtgcgccagtggacacgggggaaacctttaccgaagcctttgat
acagtgatcgccgccgtatctcaagcgccagatctgagctttatgcaagatcctaaagga
cagcttagccatggcgaactggcgctgagccgttggaacacactaatgggttgtgagcaa
accatgtcatcgggcgtggaaaagctgtttgtgatgggcgatgcccgccgcggcccagcc
accgccgttgccgccattggtgatggccgaaaggcagcaaaagccattgataaaatgctt
caaattggccttagctgcgatttgcatgcccatgaatttaactcggtaaaaaccattccg
ggctcccttaaacaggctgaggtcaaatcagcagaagcaagttcacccctctacccccat
acaaaacgtcagccccgcttaaaaatgcccgaactcacggcgctgcaacgactactcaat
tacagtgaagtagaattgggctttcccgcagatgccgccatgcaagaagcggcacgttgc
cttgagtgtgcttgccaagccaatactgactgtaaacttagggattacgccacggattac
ggtgttgagagcaaaagcttagccaccgaaaatgcacggtattttagcgtagataagagt
tcgccctttattcaattcgatgccaaccgttgtattagctgcggcaaatgcgtcgatgtg
tgtcagcagcagagtggtcactgcgcgattcaattcgcgaaagactcctaccaagtactg
ccgcagagcatcagtcctgctgatgagcgaagagcccccagagttggctttagtgccagc
atggccgatagccactgcgtacaatgtggtaactgtgtgcaggtttgcccaacgggcgcg
ctggtcgatgcgcgggataaacgccaaggcgattgtacagagttaacaaccgcctccacc
atttgtacttactgcggtgtcggctgtcgtctcgatcttaaaatcgaccccagcaccaat
cgtattcgccatatcgaaggcaacaaagactcggtcgttaaccaaggcatgttatgtgtt
aaagggcgttttggcttcgattttattcacagcgacaaacgcctaaccaccccactaata
cgtaaaaacggcaaactgcaaccttgtagttggccggaagctatcgactatgtagcaaaa
cgtttaaccgagataaaacaaaaagatggcagcaatgccttcgcaagtctcgcctcggcc
aaggccaccaatgaagataactttgtactgcaaaagtttgtccgtagcgtccttggcacc
aacaacatcgaccattgcgcccgcctgtgtcactcctcgaccgttacgggcctgcagcag
agcattggtagcggcgccatgaccaatgatattctgagtataaaggactccgacgtcatt
tttattctgggttccgataccacctgcgcccatccgattatcgcctcaaaaatccagcag
gcagtcaacctgtacggcgctcggttgatcgtggccgatccgaaacgcgttggcatagca
gaaaaggccgaactctatgttgcccacagaccgggcacggatgtgatgctgctcaacgcc
attatggcagaaattattcgcaataattggcaggataaagactatattgccaagcggacc
gaaggcattgaggcactgtatgccgagcttgccaaggaggattactcccttgaaaaagcg
gcacttatcacaggtgttaaagctgagaatatcgcccgtattgcgcgtaccataggcacg
gcgcaaaaaacggcggtgtactacgccatggggataacccaacataccacggggcacgat
aacgtcaccgccatatctaatctgcagctactttgcggcaatattggtgtgtcaggagct
ggcatcaacccactgcgcggccagagtaatgtgcagggcgcctgcgatatgggcgcgctg
cccaactattttaccggttaccaaaaggtcacggatattcatgccagaatgcgcttcgaa
agccattggcaaactccgttatcgggggagattggcgtcacagcaacccatatgatgcat
gatattgccaagggcaaaatcaacgccttatatgtgatgggtgaaaacccagtgctgagc
gatcctgaccaagcccatgtgcttaacgccttaagccagattgagtttttagttgtccag
gacatctttttaaccgagaccgctgagcttgcccatgtggtgttgcccgccgccgctttt
gtggaaaaacgcggccactttaccaacaccgaacgacgagtacagcgacttgagcaagcg
cttgcctcaccgggtgaagcgctgcccgattggcaaatcgtacaagcgattgccaatgct
atgggagcaaactgggattataaagatgaagcagcaatttgggctgaaattaatgcatta
acgcctcagtatcgcggcattctttgggagagattaaccgctggtgaggatggtcaaatc
cctcaaggtattcaatggccttgtccggatgaaaagcatccgggaacaccgattatgcac
caaggtcaattcacccgcggtttaggtttatttacgccggtcagctatcgccttcccgct
gaaatgccctgcaacgagtatccacttacgctctcgacaggtcgtctattggagcaattc
catacgggcaccttaacgcgcaaaacgcccgggctggacttacttggtgcacctaaagtg
atgatttctgtctacgatgccgaacaactcgggattaataacggcgataaaattcgccta
accacccgccgtggcgagattgaaattgatgcctttgtgacaaaacgcgctcaggcaggc
gtactgttcttacccttccattttgtcgaagccgcagcgaacaaactcaccatcaatgca
ttagatcccgtggcttatatccccgagtataaagtgtgtgcggtaagagttgaaaaggtg
acaaagcagatgtgtgagcccacctaa
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