Shewanella oneidensis: SO_0992
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Entry
SO_0992 CDS
T00099
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase LysS
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
son
Shewanella oneidensis
Pathway
son00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SO_0992 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
son01007
]
SO_0992 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
son03016
]
SO_0992 (lysS)
Enzymes [BR:
son01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
SO_0992 (lysS)
Amino acid related enzymes [BR:
son01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SO_0992 (lysS)
Transfer RNA biogenesis [BR:
son03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
SO_0992 (lysS)
Prokaryotic type
Other AARSs
SO_0992 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AAN54065
UniProt:
Q8EI58
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All DBs
Position
1025577..1027079
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AA seq
500 aa
AA seq
DB search
MTEQVQDENKLIAERRAKLDSIRPNCSANAHPNTFRRTHKAAELQEKYGQNTKEELEALG
FRTSIAGRIMAKRGPFLVIQDVSGRIQAYAEKGVQADLKDRYQGLDIGDIIGVTGQLHLS
GKGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRQAFVMRSKVV
AAIRNFMIKKEFMEVETPMMHVIPGGASARPFITHHNALDMPMYLRIAPELYLKRLVVGG
FERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYQDLMDLTEELLSSIAIELLGSAQM
PYGEHTVDFGGPYARLSMLEAIQKYNPDNATIQAMTYEQVKDLEFMRELAISLGIKIEKF
WTCGQLLEEIFGETAEWQLMQPTFITGYPADISPLARRNDDNHFITDRFEFFIGGREVAN
GFSELNDAQDQDSRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVML
FTNTHTIRDVILFPAMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaagtacaagatgaaaacaaactgattgccgagcgtcgtgccaagctagac
agcattcgcccgaactgcagcgcgaatgctcaccctaatacgttccgtcgcacccataaa
gcggcagagttgcaggaaaaatacggtcaaaatactaaggaagaactcgaagccttaggt
tttagaaccagcatcgctggccgtatcatggcaaaacgtggcccattcctagtgatccaa
gacgtgtctggtcgtatccaagcttacgctgaaaagggcgttcaagcggatctgaaagat
cgttaccaaggtttggatatcggtgacatcatcggcgtgactggtcagttgcacttgtct
ggtaaaggcgatctgtacgtcaacatggaagagtaccaactgctgactaaagcactacgt
cctctgccagaaaaattccacggcttaacagatcaagaaacccgttaccgccaacgttat
gttgacttaatcgttaacgaagaatctcgtcaagccttcgtaatgcgttcaaaagtggtt
gcagctatccgtaacttcatgatcaaaaaagagttcatggaagttgaaaccccaatgatg
cacgtgatcccaggcggcgcttctgcccgtccatttatcacgcaccacaatgcgctggac
atgcctatgtacctgcgtatcgcgccagagttatacctcaagcgtttagtggtgggtggt
tttgagcgtgtgttcgaaatcaatcgtaacttccgtaacgaaggtctgtcaccacgtcat
aacccagaattcactatgatggaattctatatggcctatgctgactaccaagatctgatg
gacttaaccgaagaattgttaagctcaattgcaatcgaactcttaggtagcgcgcaaatg
ccatatggcgagcatactgttgatttcggtggtccttatgcccgtttaagcatgctagaa
gcgattcagaagtacaatcctgataacgcgactatccaggccatgacctacgagcaagtg
aaagatcttgaatttatgcgtgaactggctatcagccttggcatcaagattgagaagttc
tggacctgtggtcagctattagaagaaatcttcggtgaaaccgctgaatggcagttaatg
caaccgactttcatcactggctacccagcggacatttcgccactggcacgtcgtaacgat
gacaaccactttattaccgaccgttttgaattcttcatcggtggccgtgaagtagctaac
ggcttcagcgagttaaatgatgcgcaggatcaagacagccgctttaaagcgcaggttgat
gccaaagacgcgggtgacgatgaagccatgttctacgatgcggactacatcactgcactg
gaacacggtttaccaccaacagcaggtcaaggtatcggtatcgaccgtttagtgatgcta
ttcactaacactcacactatccgtgatgtgatcctattcccagcgatgcgcccacaggct
taa
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