Shewanella oneidensis: SO_1100
Help
Entry
SO_1100 CDS
T00099
Name
(GenBank) TRAP transporter substrate-binding component
KO
K11688
TRAP-type transport system periplasmic protein
Organism
son
Shewanella oneidensis
Pathway
son02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
son00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SO_1100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
son02000
]
SO_1100
Transporters [BR:
son02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SO_1100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
AAN54171
UniProt:
Q8EHW2
LinkDB
All DBs
Position
1141864..1142976
Genome browser
AA seq
370 aa
AA seq
DB search
MRYLGGLLFTVLFFGATGCNPSSQHAEPISKASITDAPPVKQVIEWRLATSWPKNFPGLG
MAPERFATLVNDMSHGQLRITVHGAGELMPAFAVFDGVSQGKIQMAHAASYYWKGKTPAS
QFFSSIPFGMTAQEMNGWLHYGGMALWEEVYRPFGIIPLAGGNTGMQMGGWFNKPINTIA
DFKGLKIRMPGLGGEVLKRVGAVPVNMAGRELFSALQTGSLDAAEWVGPVNDLAFGLHKV
AKYYYYPGWHEPGSNMEFLINKAAFESLPEDLQTVVKTAARAINQDMLDEYTTSNVTALE
TLVKEEGVELRAFPPAVLTELERISHQVIGEQAEQDPMMGKVYRAYHAYEQGVREYHKIS
EDAYSQQRQH
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcgttatttggggggactgttatttacggtattgttttttggtgcgactggctgtaat
ccctcatcccaacatgctgaacctatttctaaagcgtccattactgatgcacctcccgtg
aagcaagtgattgaatggcgtttagccacctcttggccgaaaaatttccccggcttaggt
atggcgccagagcgttttgcaacgctggttaatgatatgtcccatggtcaattgcgcatt
accgtgcacggcgctggggaattaatgcctgcctttgcggtattcgacggggttagccaa
ggtaaaattcagatggcccacgccgcttcctattattggaagggcaaaactcccgcctca
cagtttttttcttcgattccatttggaatgacagcacaggaaatgaacggctggttgcat
tatggcggcatggcgctgtgggaggaggtttatcgcccctttggtattattcccttagca
gggggaaatacaggcatgcaaatgggcggctggtttaataaacccatcaatacgattgcc
gactttaaagggctgaagatccgaatgccagggcttggtggagaggtacttaagcgtgtt
ggcgccgtgcctgttaatatggctggcagagaactgtttagtgcgctacaaacaggctcg
cttgacgccgccgaatgggttgggccagttaacgatctcgcctttggtttgcataaagtc
gcgaaatattattactatcccggttggcatgaacctggttccaatatggaatttttgatc
aacaaagccgcctttgagagtcttcccgaagatttgcaaactgtcgttaaaacagcggcc
cgtgctatcaatcaagatatgttggatgaatacaccacgagcaatgtcaccgccctcgaa
accctcgttaaagaagaaggtgtcgagcttagggcttttccgcctgcggtgttaaccgaa
cttgagcggatctcacatcaggtgattggagaacaagcggaacaagatcctatgatgggc
aaggtgtaccgtgcttatcatgcttatgaacagggagtgcgtgaataccataagatttct
gaggacgcatacagccagcaacggcagcattaa
DBGET
integrated database retrieval system
