Shewanella oneidensis: SO_1142
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Entry
SO_1142 CDS
T00099
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit CarB
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
son
Shewanella oneidensis
Pathway
son00220
Arginine biosynthesis
son00240
Pyrimidine metabolism
son00250
Alanine, aspartate and glutamate metabolism
son01100
Metabolic pathways
son01110
Biosynthesis of secondary metabolites
son01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SO_1142 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SO_1142 (carB)
00220 Arginine biosynthesis
SO_1142 (carB)
Enzymes [BR:
son01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
SO_1142 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_4
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AAN54212
UniProt:
Q8EHS5
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All DBs
Position
1182946..1186170
Genome browser
AA seq
1074 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIQWEVVRNIIAKERPDAILPTMGGQTALNCALELEAKGVLAEFNVEMIGATA
DAIDKAEDRSRFDKAMKSIGLECPRAGIAHSMEEAYGVLEQVGFPCIIRPSFTMGGSGGG
IAYNKEEFEEICSQGLDLSPTKELLIDESLIGWKEYEMEVVRDRNDNCIIVCSIENFDPM
GVHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELMNDITGGRTPASFEPAIDYVVTKVP
RFNFEKFAGSNDRLTTQMKSVGEVMAIGRTFQESLQKALRGLEVNRHGLDPITDMSKPEA
MARIRLELKEPGCDRIWYIADAMRAGLTLDEIFRLTNIDPWFLVQIEELIKLEGQVAEAG
LAGLNEELLRKLKRKGFADARLAVVLGVNESEVRKLRDRFDIHPVYKRVDTCAAEFATDT
AYMYSTYEEECEANPSNRDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPI
IGTSPDAIDRAEDRERFQQAIQRLEMKQPENDTVTTVEGAVIAAERIGYPLVVRPSYVLG
GRAMEIVYDQQDLLRYFNEAVSVSNASPVLLDHFLDDAIEVDIDAVCDGETVVIGAIMEH
IEQAGVHSGDSGCSLPPYTLSQEIQDRMRVQVGKLAMELGVVGLMNVQFAVKNNEIYMIE
VNPRAARTVPFVSKATGVPLAKIAARVMAGQSLKAQNFTQEVIPPFYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGDTFAEAYAKAQLGATSEVPKSGRALLSVRNSDKKRVADLA
AKLIELGYQIDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNGEYTYIVNTTEGRQ
AIEDSRQLRRGALRYKVNYTTTMNAAFATCMAHAADDRTNVTSVQELHKRILAK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagatataaagagtattcttatcctaggtgcaggcccgattgtcatt
ggtcaggcatgtgaatttgactattcaggcgctcaagcctgtaaagccctgcgtgaagaa
ggttaccgcgtcattctggtgaactctaaccctgccaccattatgaccgaccctgaaatg
gccgatgccacttatatcgagccaattcaatgggaagtagtacgtaacattatcgccaaa
gaacgccctgacgcgattctgcccaccatgggcggtcaaactgcactgaactgcgcactc
gagcttgaagccaaaggcgtactggccgaatttaacgtggaaatgatcggcgcgaccgcc
gacgcgattgataaagcagaagatcgtagccgtttcgacaaagccatgaagagcattggc
ttagaatgtccacgcgcgggcatcgcccacagcatggaagaagcctatggcgttcttgag
caagtgggtttcccttgtattatccgcccatcgttcactatgggtggttcaggtggtggt
atcgcctataacaaggaagagttcgaagaaatctgttctcaaggcttagatttatcgcca
accaaagagctactcatcgacgagagcttaattggttggaaagaatacgagatggaagtg
gttcgtgatcgtaacgacaactgcatcatcgtgtgttctatcgaaaacttcgacccaatg
ggtgtgcatactggcgactctatcacagtagcacccgcgcaaacgctgactgacaaagaa
taccaaatcatgcgtaatgcctctatggccgtactgcgtgagattggtgttgaaaccggt
ggttctaacgtacagtttggtatcaacccgaaagatggccgtatggtgatcatcgagatg
aacccacgggtatcgcgttcatctgctctggcatcaaaagcaactggcttcccgattgca
aaaatcgcggccaagttagcggtgggtttcaccctcgatgagctgatgaacgacattact
ggtggtcgcacaccagcctcgtttgaacctgcaatcgattacgttgtgactaaagtccct
cgctttaactttgaaaagttcgccggttccaacgatcgcttaaccactcagatgaaatct
gtgggtgaagtgatggcaattggccgtactttccaagagtcactgcaaaaggcattacgt
ggtttagaagtgaatcgtcacggtttagaccctattactgacatgtctaagccagaagca
atggcccgtattcgcctcgagctgaaagagcctggttgtgaccgcatttggtacatcgct
gatgcgatgcgcgcgggattgacgctcgatgaaattttccgtttaaccaatatcgaccct
tggttcttggtacaaattgaagagttaatcaagcttgaaggtcaagtggctgaagcgggg
ctggctggtttaaacgaagagctgctgcgcaaactcaagcgtaaaggctttgccgatgcg
cgtctggccgtcgtactgggtgtaaacgagagcgaagttcgtaaactgcgtgaccgtttc
gatatccacccagtctacaagcgcgtagatacctgtgcggccgagtttgcgactgacacc
gcttacatgtactcaacctacgaggaagagtgtgaagccaatccatctaaccgtgacaaa
atcatggtgttaggtggtggtccaaaccgtattggtcaaggtatcgaattcgattactgc
tgtgtgcacgcggcattagcactgcgtgaagacggttatgaaaccatcatggtgaactgt
aaccctgaaaccgtttcaaccgactacgacacgtcagaccgtctgtatttcgagcctgtt
actttagaagacgtgttagaaatcgtccgtatcgagaagccaaaaggcgttatcgtacag
tacggtggtcaaactccgctaaaactggctcgcgctcttgaggctgcgggtgtgcccatt
attggtactagcccagatgcaattgaccgcgctgaagaccgtgagcgtttccaacaggcg
attcaacgtctggaaatgaaacagcctgaaaacgataccgtgaccacggtagaaggtgca
gtgattgccgcagaacgtatcggttatccgctagtggtgcgtccatcctacgtactgggc
ggccgcgcgatggaaatcgtttacgaccaacaggatttactgcgctactttaacgaagcc
gtcagcgtatctaacgcttcaccagtactgttagaccacttcctagacgatgctatcgaa
gtggatatcgacgcagtatgtgacggcgaaaccgtagttatcggcgccatcatggaacat
atcgagcaggctggggttcactcaggtgactctggttgttctctgccaccttatacctta
agccaagaaatccaagatcgcatgcgtgtgcaagtcggcaagttggcgatggagttaggt
gttgtcggtctaatgaacgtacagtttgccgtgaagaataacgaaatctacatgattgaa
gttaatccacgtgccgcccgtactgtgccatttgtatcgaaagcgactggtgtaccttta
gcgaagattgccgcccgtgtgatggcaggtcaaagtttgaaggcgcaaaactttactcag
gaagtgatcccacctttctattcagtgaaagaagtggtactgccatttaacaagttccct
ggcgtggacccactgttaggcccagaaatgcgctcgacgggtgaggtgatgggtgtgggc
gataccttcgccgaagcctatgctaaggcgcagttaggtgcgacttctgaagtgcctaag
tctggtcgtgcgctgctatctgtgcgtaacagcgacaagaaacgcgttgccgacttagcc
gctaagctgattgagctgggttatcaaatcgatgcgacccacggtacagcggttatccta
ggtgaagcggggatcaaccctcgcttagtgaacaaggtacacgaaggtcgtccacacatt
cttgaccgcatcaagaacggtgagtacacttacatcgtgaacacgactgaaggccgtcaa
gcgattgaagactcgcgtcaattacgccgcggtgcactgcgttacaaggtgaactacacc
acgacgatgaacgccgcctttgcaacctgtatggctcacgcagcggatgaccgcaccaat
gtgacctcagtacaagagttgcacaagcgcatattggctaaataa
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