Shewanella oneidensis: SO_1168
Help
Entry
SO_1168 CDS
T00099
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2 MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
son
Shewanella oneidensis
Pathway
son00550
Peptidoglycan biosynthesis
son01100
Metabolic pathways
son01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SO_1168 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SO_1168 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
son01011
]
SO_1168 (mrdA)
Enzymes [BR:
son01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SO_1168 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
son01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SO_1168 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AAN54238
UniProt:
Q8EHP9
LinkDB
All DBs
Position
complement(1210703..1212559)
Genome browser
AA seq
618 aa
AA seq
DB search
MSPKKRITMHDHAAEASLFKRRALFTFFCVVALLSMLVTNLYHLQVESYKDYATRSNDNR
IRVVPIAPSRGLIYDRNGVLLAENQPFYSLDLVPEKIANMSETLDELGKLIEISPDEREN
FTEALKFHRRFKPLTLKNQLTEEQVAIFSVNQHRFPGITVEAGLKRNYPYVSQLTHVLGY
VGKINTRDRAQLERNDQWKNYAATKDIGKQGIEKFYESLLHGTPGHLEEEVNNRGRTIRT
LKIVPPEPGQDIYLTLDLQLQQKAVELLQGHKGSIVAIDPRDGGILALVSSPSYDPNQFV
QGINRKDYSDLLNDKSRPLINRATQGQYAPASTVKPIIALLGLDEKAVTEHTRIWDPGFW
QIPGVERKYRDWKRWGHGWVNVYSAIVESCDTYFYELAYKIGVDPIARFMEQFGFGQNTG
VDIFEESTGNMPSKEWKRLKYNQAWYIGDTISVGIGQGYWTATPLQLASATAILANNGRR
FPPHLLKSIKDNTAKIDSPINELPPIELKNPRNWKIINEAMRQTAHKSRFTDASYTAAMK
TGTAQVIGVAENTKYDANKIAEHFRDNALVVAYAPFENPKIVLAVVMENAGWGGANAGPV
ARAMLDEYMLRDTWKPTP
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgccaaaaaagcggataaccatgcacgaccacgccgcagaggcgtcactatttaag
cgccgtgcgctgttcacttttttttgtgttgtcgcccttcttagcatgttggtgaccaat
ctttatcatcttcaggttgaatcctataaagattacgcaacacgatcgaatgacaaccgt
attcgggtcgtccccatcgcccctagtcgtggcttgatttatgatagaaacggcgtgctg
ctcgccgagaaccaacccttttattccctcgatttggtgcctgagaaaattgccaatatg
tctgaaaccttggacgaattgggtaagttaattgagatcagccccgacgagcgtgaaaac
tttaccgaagcattaaagtttcaccgccgctttaagcccttaaccctaaaaaatcagctg
accgaagaacaggtcgctatttttagcgtgaaccaacatcgttttccagggatcaccgtc
gaagcgggtttaaaacgtaactatccctatgtcagtcagctcacccatgtgttgggttat
gtgggcaaaatcaacacccgagatcgcgcccaattagagcgcaacgatcagtggaaaaac
tatgccgctactaaagatattggtaagcaaggcattgaaaaattttatgaatcactcttg
cacggtacgcctggccacctagaggaagaagtgaacaaccgcggccgaactatccgcacc
cttaaaattgtgccaccagagccgggacaagatatttacctcaccctcgatttgcaattg
cagcaaaaagccgtggaattactccaagggcataaaggttctattgttgctatcgatcca
agggatggcgggattttagccttagtatccagccctagttacgatcccaatcagtttgtt
caagggattaaccgcaaagattacagtgatttactaaacgataaatcgcggccgctgatt
aaccgtgctacccaaggccaatatgcgcccgcatcaacggtcaaacccattattgcccta
ctgggactggatgaaaaagccgtaactgaacacacccgcatttgggaccctggcttttgg
caaattcccggcgttgagcgtaaataccgcgactggaaacgttggggccatggctgggta
aacgtctacagtgctatcgtagaatcctgcgatacctacttctatgaattggcttacaaa
atcggtgtcgaccctatcgctcgttttatggagcaatttggctttggccaaaataccggt
gtcgacattttcgaagagtcgacgggcaacatgccttcaaaggaatggaaacgcttaaag
tacaaccaagcttggtatattggcgacacgatttcagtcggtattggccaaggttactgg
acagcaacaccattgcaacttgccagtgcaacagccattctcgccaataatggccgtcgt
tttccgccgcatttgttaaagtcaatcaaagataatacagcgaaaattgattcgccaatt
aacgagttaccgccaattgagcttaaaaatccgcgtaactggaaaatcatcaacgaagcc
atgcgccaaaccgcccataaatcccgcttcaccgacgcaagctatacggcggcgatgaaa
accggtacggcgcaggtaattggtgtcgcagaaaacaccaaatacgatgctaacaaaatt
gccgagcatttccgcgataacgccctcgttgtcgcctatgcgccctttgaaaatccaaaa
atcgtgctggctgtggtaatggaaaacgccggttggggtggggcaaacgcaggccctgtg
gcccgcgccatgctcgatgaatatatgctcagagacacttggaaaccaacgccatga
DBGET
integrated database retrieval system
