Shewanella oneidensis: SO_1356
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Entry
SO_1356 CDS
T00099
Symbol
ffh
Name
(GenBank) signal recognition particle protein Ffh
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
son
Shewanella oneidensis
Pathway
son02024
Quorum sensing
son03060
Protein export
son03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
son00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SO_1356 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SO_1356 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SO_1356 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
son02044
]
SO_1356 (ffh)
Enzymes [BR:
son01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SO_1356 (ffh)
Secretion system [BR:
son02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SO_1356 (ffh)
Eukaryotic Sec-SRP protein
SO_1356 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
AAA_24
AAA_30
AAA_33
YqeC
FliD_C
Helicase_RecD
AAA_16
AAA_14
KAP_NTPase
TsaE
APS_kinase
AAA_31
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AAN54421
UniProt:
Q8EH73
LinkDB
All DBs
Position
1411847..1413220
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AA seq
457 aa
AA seq
DB search
MFENLTDRLSRTLKNISGRGRLTEENVKETLREVRMALLEADVALPVVREFVNNVKERAV
GQEVAKSLSPGQAFIKIVQSELEKSMGEANQALDLATQPPAVVMMAGLQGAGKTTSVAKL
GKLLRTRHKKSVLVVSADVYRPAAIKQLETLATEVDVEFFPSDVSQKPIDIAKAAIAHAK
LKFIDVVILDTAGRLHVDEAMMDEIKALHAALKPIETLFVVDAMTGQDAANTAKAFNEAL
PLTGVILTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGDV
LSLIEEVERGVDKEKAMKLASKVKQGGSFDLEDFREQLQQMKNMGGMMSMIEKLPGVGQL
PPDALAQIQDGKMTRQMEAIINSMTAKERKNPDLIKGSRKRRIAAGSGTEIQDVNRLLKQ
FTQMQKMMKKMSAKGGMQKMMRGMRGMMPGGMKFPGR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaatctaaccgacagactgtcacgcacgctgaaaaacatcagcggccgtggt
cgcttaaccgaagaaaacgttaaggaaaccctgcgcgaagtgcgtatggcgctgctggag
gccgatgttgccctgcctgtggtgcgtgaattcgttaacaatgtaaaagaacgtgccgtt
ggccaagaagtggcgaaaagcttaagccctggccaagcctttattaagattgttcaaagt
gaacttgaaaaatccatgggcgaggcgaaccaagccttggatttagctactcagccacct
gcagtggtgatgatggctggcttacaaggtgcgggtaaaaccaccagtgttgccaaattg
ggtaaactactgcgtacgcgccacaaaaaatcggtgttagtggtcagtgccgacgtatat
cgtcctgcggctatcaaacagcttgaaaccttagcgaccgaagttgatgtggaattcttc
ccatccgatgtcagccaaaagcccattgatatcgctaaggctgcaattgctcacgctaaa
ctcaaatttatcgatgtggtgatcctcgataccgcgggtcgtttgcacgtcgatgaagcc
atgatggatgaaatcaaggccttgcacgcggcgctcaagcctatcgaaaccttgttcgtg
gttgatgctatgacaggtcaagatgcggcgaacacggctaaggcatttaatgaagcctta
ccattgacgggggtgattttaactaaggttgatggtgatgcccgcggcggtgctgcacta
tcgattcgccacattacaggcaagccaattaaattcctcggtgtgggtgaaaagaccgat
gccttagaacctttccatcctgaccgtatcgcctcacgcatattgggtatgggtgacgtg
ctctcacttattgaagaagtggagcgcggtgtcgataaagaaaaggcgatgaagctcgct
tccaaagtgaagcagggcggcagtttcgatctcgaagacttccgtgaacagctgcaacaa
atgaaaaacatgggcggcatgatgagcatgattgaaaagctgcccggtgttggccagttg
cctccggatgccctagcgcaaatacaagatggcaaaatgactcggcaaatggaggcgatc
atcaactcgatgacagccaaagagcgtaaaaacccagatttaatcaaggggtcacgtaag
cgccgtattgctgctggttcggggactgagattcaagatgtaaatcgtttattgaaacaa
tttacccaaatgcaaaaaatgatgaagaagatgtcggctaagggcggcatgcaaaagatg
atgcgtggaatgcgcggcatgatgcctggtggaatgaaatttcccgggcgctaa
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