Shewanella oneidensis: SO_1495
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Entry
SO_1495 CDS
T00099
Symbol
glgX
Name
(GenBank) glycogen isoamylase GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
son
Shewanella oneidensis
Pathway
son00500
Starch and sucrose metabolism
son01100
Metabolic pathways
son01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
SO_1495 (glgX)
Enzymes [BR:
son01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
SO_1495 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
GlgX_C
Motif
Other DBs
NCBI-ProteinID:
AAN54556
UniProt:
Q8EGU6
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Position
1562511..1564763
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AA seq
750 aa
AA seq
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MTSAALINSGGSLPYSVSAGKAFPLGATVDDGGVNFALFSAHATGVELCLFDAQGKVEIQ
RIALTEQTQQIWHLYVHGLCAGQLYGYRVYGPYEPQLGHRFNPHKLLLDPYARQLVGRYH
HHIANFGYELDNPNEDLSFSTLDNAAYMPKCKVVDIRPLLAAAESQAIRPLSPHRNPLPI
EQCIIYEMHLKGFTALHPEIDVPLRGTFAGLASKAAIDYLVKLGVNCVELLPIQAFFSEP
FLLEKQLSNYWGYNSIGFFAPEPSYLSSEDIIEFRTMVDALHGAGIEVILDVVYNHSAEG
SRLGPTFSFRGIDNLSYYRLHPNDKRFYINDTGCGNTLNLNHPRMLQLVLDSLRYWVKVM
GVDGFRFDLAASLGREAYGFDPGSGFFDALLQDPVLCRVKLIAEPWDIGPGGYQLGNFPV
AFSEWNDRYRDTMRRFWRGDHGMLPEFARRFHGSGDFFEHSGRPPAASINFLTSHDGFTL
KDLVSYCERHNWANGEENRDGHHANFSYHYGVEGASNDVSVLVLRARQQRNLLTTLFLSQ
GVPMLLSGDETGRTQGGNNNAYCQDNPMNWFDWSSEGMDKHLLSFTQQLIALRKRFPLLC
AKRFIHEQLVARSLESPSESPLGAAKFLTQPSARLDWFSRQGKPMTKSLWSESMCRSLCV
VLSGDLTAGIDVAGDNSFQALLLMVNADEHPLAFTPPVFEHLGPWQCLLHTQTEPQYLTP
TEPLDAQSSPTRYLLQDRSLMLFHADFIRN
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtgctgcgcttatcaattccggcggttcactgccttattccgtaagcgcgggt
aaggcttttccgttaggggcgacggtcgatgatggcggggttaatttcgcgctattttcg
gcccatgccacaggggtggaattgtgtctcttcgacgcacaaggtaaggtcgaaattcag
cgcattgctttgacggagcaaacccagcaaatctggcatctgtatgtacatgggctctgt
gcaggccagctttatggctatcgtgtctatggtccctacgagccccaattaggccacaga
tttaatccgcacaaattgctattagacccctacgcccgccagctcgtggggcgttatcat
caccatattgccaactttggctatgagttagataaccctaacgaagacttatcttttagt
accttagataacgccgcttatatgccaaaatgcaaggtcgtcgatattcgaccactgctt
gctgcggccgaatcgcaggctattcggccactttcaccccatcgaaatccactaccgatt
gagcagtgcattatttatgagatgcacttaaaaggctttaccgcgctgcaccctgagatc
gacgtgccgctacgtggcacctttgcaggattggcatcgaaggctgcgatagattactta
gtcaagcttggtgtgaattgcgttgagctgttaccgattcaggcatttttctccgaaccc
tttttacttgaaaaacagctgtctaactattggggctacaacagtattggctttttcgcg
ccagaaccgagttatctctcgagtgaggatattattgagtttcgcactatggtggatgcg
ctacatggcgcgggcattgaagtgattcttgatgtggtctacaaccatagcgccgaaggc
agccgtctcgggccaacttttagcttccgtggtatcgacaatctgagctattaccgtcta
catccaaacgataaacgcttctatatcaatgatactggttgtggcaataccttaaacctc
aatcatccccgcatgttgcagttggtgttggactcactgcgttattgggtgaaggtcatg
ggcgttgatggttttcgtttcgatttagcagccagtcttggccgtgaagcctatgggttt
gatcccggctccggcttttttgatgcgctgctgcaagaccccgtgctttgccgtgtgaag
ttgattgccgaaccttgggatataggtcctggcggttatcagctcggcaatttcccggtg
gcctttagcgagtggaacgacagataccgcgatacgatgcgccgattctggcgcggcgat
cacggcatgttaccggaatttgcgcggcgctttcatggctcaggggatttttttgagcat
agtggccgcccgcccgctgccagtatcaatttcttgaccagtcacgatggttttaccctg
aaagatttggtgagttactgcgagcggcacaattgggccaacggtgaagagaatcgcgat
ggccaccatgcgaacttcagctaccactacggagtggaaggggcgtccaacgacgtttca
gtgttagtgctacgcgcccgccagcaacgcaatttactgaccaccttatttttgtcccaa
ggcgtgccaatgctgctcagcggtgatgaaacgggccgcactcaaggcggaaataataac
gcctattgccaagataacccgatgaattggtttgattggtcatctgagggaatggataaa
catctgctgagttttacccaacaacttatcgccttgcgtaagcgctttccgctcttatgt
gcaaaacgttttatccatgaacagctggtggctcgttctctcgaatcgccctcagagtcg
cctttaggtgctgcaaagttcttaactcagccaagcgcgaggttagattggtttagtcga
caaggtaagccaatgacaaaaagcctgtggagcgagtctatgtgccgcagtctctgcgtg
gtgttatccggtgatttaaccgcaggcattgatgtggctggtgacaacagctttcaagcc
ttgctgttaatggtgaatgccgatgagcatccgttggcatttaccccgcctgtttttgag
catttaggtccgtggcaatgcttgctacatacccaaaccgaaccgcaataccttactccc
actgagccgctggatgctcagtcctcaccaacacgatacttactacaagatcgcagtctt
atgctgtttcatgctgattttataaggaattaa
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