Shewanella oneidensis: SO_1527
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Entry
SO_1527 CDS
T00099
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit XseB
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
son
Shewanella oneidensis
Pathway
son03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
son00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SO_1527 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
son03400
]
SO_1527 (xseB)
Enzymes [BR:
son01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SO_1527 (xseB)
DNA repair and recombination proteins [BR:
son03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SO_1527 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_S
YhaL
TACC_C
DUF8180
DUF6687
Rv0250c
Motif
Other DBs
NCBI-ProteinID:
AFV73532
UniProt:
K4PTY3
LinkDB
All DBs
Position
complement(1603951..1604199)
Genome browser
AA seq
82 aa
AA seq
DB search
MAKKPENLSFEESLGELERIVAELEQGDVSLDDALKQFERGINLVRNSQAKLEQAQQKVA
ILLKQDENVPLSPYAVEGESAC
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaagaaacccgaaaacctcagttttgaagaatcccttggtgaactcgagcgcatc
gttgctgagttagagcagggcgatgtctctctcgatgatgcgttaaaacaatttgaacgt
ggcatcaatttagtgcgtaacagccaagctaaactcgaacaagctcagcaaaaagtggcc
attttgcttaaacaagatgaaaatgtgcccctctctccctatgccgttgagggcgaatca
gcgtgttag
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