Shewanella oneidensis: SO_1575
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Entry
SO_1575 CDS
T00099
Symbol
rsmB
Name
(GenBank) tRNA/rRNA cytosine-C5-methylase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
son
Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
son03009
]
SO_1575 (rsmB)
Enzymes [BR:
son01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
SO_1575 (rsmB)
Ribosome biogenesis [BR:
son03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SO_1575 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltransf_31
Methyltransf_25
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
AAN54632
UniProt:
Q8EGM5
LinkDB
All DBs
Position
complement(1651959..1653335)
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AA seq
458 aa
AA seq
DB search
MGNPNGLSSTTIHSAFNIEPQTPAQKRAMSYANTTKLLFDEILSAKQPADRVLANYFREH
KKHGSKDRKVIRESLFSLFRWWGWFKAAGDHQQAAHFFAMLSASALLEAHPWQDIAQAWH
ELSQSTHDYQRLQSIPVNNLTDKLALVRQLFPQVVLELTDLLPEWFWQVCPIDAKRRPNL
IEAMSSRPPIWGRAQSINSQTAVSQLQALGIEASLSPFFEDAINLGSKSMNLNEITLYKE
GNIEIQDLASQVIGQICAPEPWQHWWDACSGAGGKTLQLRSLMQTAATKQHTPLQGSIVS
SDIRANALEELSKRAQRAQFDGISIARWRSDALPVAANYFDGVLVDAPCSCTGTWRRNPD
MRWLDTLDAVMDKATLQLDILSRSSQAVKAGGTLIYATCSLSPVENEEVVSAFLQQHPEF
NLVPIRHPFTGEQTEMLTVWPFEANTDGMFVARMQRKH
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatccaaacggcttatcatctaccactattcactccgcttttaatatcgaaccg
caaacgcccgcacaaaaacgcgcgatgagctatgccaataccactaagttgttgtttgat
gagattttaagcgcaaagcaacccgctgaccgagtgttagcgaactactttagggaacat
aaaaagcacggttcgaaggatcgcaaagtcatccgcgaatcgctatttagcctgttccgt
tggtggggctggtttaaagccgcaggcgatcatcagcaggctgctcacttctttgccatg
ctgagcgccagcgccttacttgaagcgcacccttggcaagacattgcccaagcgtggcat
gaactctctcaatcgactcacgattatcaacgcttacaatccattcccgttaacaatctc
acggataagttggcgttagttcggcaattattccctcaggtagtcttggaactgacagat
ttgttacccgagtggttttggcaggtttgtcccattgatgcaaagcgccgccccaatttg
atagaagccatgtcaagccgtccgcctatttgggggcgagcacagagcataaacagccaa
actgcggtgagccaattgcaagcattaggcattgaagcgagtctcagtccattttttgaa
gatgcgatcaatcttggcagtaaaagtatgaatctcaatgaaattaccctctacaaagaa
ggtaacattgagatccaagatttagcctcacaggtaataggccaaatttgtgcacctgag
ccttggcaacactggtgggatgcctgcagtggcgctggggggaaaaccctgcaattgcgt
tcgttaatgcaaacggccgcaaccaagcaacatacgccattacagggcagcatagtgtca
tcggatattcgcgccaacgccttagaagagctcagcaaacgcgcgcagcgagcacagttt
gatgggatcagcattgcgcgctggcgcagtgatgcccttcccgtggccgccaactatttt
gatggggtattagtcgatgccccctgcagctgcacgggcacatggcgccgtaacccagat
atgcgctggctcgatacacttgacgccgtgatggataaagcaacgttacagctcgatatt
ttaagccgcagcagccaagcagtaaaagcgggcggaaccttaatctacgccacttgctca
ctatcacccgttgaaaacgaagaagtcgtttcagcctttttgcaacaacacccagagttc
aacttagtgccgatacgccacccttttaccggtgaacaaacagaaatgttgaccgtgtgg
cccttcgaagccaacacagatgggatgtttgtcgcacgaatgcaacgtaaacactag
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