Shewanella oneidensis: SO_1812
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Entry
SO_1812 CDS
T00099
Symbol
mdeA
Name
(GenBank) methionine gamma-lyase MdeA
KO
K01761
methionine-gamma-lyase [EC:
4.4.1.11
]
Organism
son
Shewanella oneidensis
Pathway
son00270
Cysteine and methionine metabolism
son00450
Selenocompound metabolism
son01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SO_1812 (mdeA)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SO_1812 (mdeA)
Enzymes [BR:
son01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.11 methionine gamma-lyase
SO_1812 (mdeA)
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GFIT
Motif
Pfam:
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_1_2
Aminotran_5
Met_gamma_lyase
Beta_elim_lyase
GDC-P
Motif
Other DBs
NCBI-ProteinID:
AAN54864
UniProt:
Q8EG02
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Position
1902203..1903396
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AA seq
397 aa
AA seq
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MQDKSSKMWKAATQAIHAGHEREAFGSLVTPLYQTATFVFDSAQQGGERFAGNEPGYIYT
RLGNPTVAELERKMAILERAEAAAATASGMGAVSAALLANLQIGDHLVASNAVYGCTFAL
MTNQFARFGIEVTLVDFSDVELIERAIKPNTKVIFCETPVNPHLQVFDLSAIAAIAKRHS
LTSIVDNTFMTPLLQQPIALGIDVVVHSATKYLNGHGDVIAGIVCGSEAQLHRVKYEILK
DIGAVMSPHDAWLILRGLKTLDVRLQRHCESAQRVAEFLEQHPAVTRVYYPGLKSHSGHR
FIGQQMRRAGGVIAFELAADFTQAMAFVGNLKLFSIAVSLGDAESLIQHPASMTHSPYSP
EARAAAGIGDNLLRISVGLEDCDDIIADLSQALAALV
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataaatcaagcaaaatgtggaaagcggcgacccaagccattcatgccggacat
gagcgagaggccttcggttctttagtcacaccactttatcaaactgcaacttttgtgttt
gattcggcgcagcaggggggcgaacgttttgcgggtaacgagccaggctatatctacacc
cgccttggtaatccgaccgttgcagagctcgagcgtaaaatggcgatattagaacgggct
gaagccgcagcagcaactgcatcggggatgggggcggtttcggcagcgctacttgcaaac
ttacagataggtgatcatcttgtggcatctaatgcggtatatgggtgtacttttgcgcta
atgaccaaccaatttgcccgtttcggtattgaggtgactttagttgactttagtgatgta
gagttgattgagcgggctattaaacccaataccaaggtgattttttgtgaaacgccagtg
aatcctcatttgcaggtatttgatctgagcgccattgcagctattgccaaacgacatagt
ctgacaagtattgtcgataatacgtttatgacgccgctgctgcagcaaccgatagcgctg
ggcattgatgttgtggtgcacagtgcgactaagtacttaaatgggcatggtgatgtgatt
gcgggcattgtttgtggtagtgaagcacaattgcaccgagtcaaatatgaaattcttaaa
gatattggtgcggtgatgtctccccacgatgcttggcttatcctacgaggccttaaaacc
ttagatgtgcgcttgcaacgccattgtgagagtgcgcagcgggttgctgagtttttagag
caacaccctgcagtgacacgagtttactatccaggacttaaatcccattcaggtcatcga
tttatcggccaacagatgcggcgtgcaggaggggtgatcgcctttgaattagccgctgat
tttactcaggcgatggcgtttgttggcaaccttaaattattttcgattgcggtcagtctg
ggcgatgcggaatctcttattcaacatccggcttcaatgacccactctccttattcgcca
gaagcgcgtgccgcagccggaattggtgataatctgctgagaatttctgtcggtttagag
gattgcgacgatatcatcgctgatttgagccaggcattagctgcgttagtgtaa
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