Shewanella oneidensis: SO_1896
Help
Entry
SO_1896 CDS
T00099
Symbol
liuB
Name
(GenBank) methylcrotonyl-CoA carboxylase carboxyl transferase subunit LiuB
KO
K01969
3-methylcrotonyl-CoA carboxylase beta subunit [EC:
6.4.1.4
]
Organism
son
Shewanella oneidensis
Pathway
son00280
Valine, leucine and isoleucine degradation
son01100
Metabolic pathways
Module
son_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SO_1896 (liuB)
Enzymes [BR:
son01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
SO_1896 (liuB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carboxyl_trans
ACCA
MdcE
Motif
Other DBs
NCBI-ProteinID:
AAN54948
UniProt:
Q8EFS0
LinkDB
All DBs
Position
complement(1993428..1995035)
Genome browser
AA seq
535 aa
AA seq
DB search
MTQLSSRINARSDEFKAKSDDMAALVADLKTKLAKIELGGGPVALERHLSRGKRLPRQRV
EKLLDAGSPFLELSQFAAFEVYDEEVPAAGIIAGIGRVSGVECMIIANDATVKGGTYYPI
TVKKHIRAQEIASRCHLPCIYLVDSGGANLPRQDEVFPDRDHFGRIFYNQAQMSAKGIPQ
IAVVMGLCTAGGAYVPAMADESIIVKDQGTIFLAGPPLVKAATGEEVSAEELGGADVHTK
ISGVADHLAQNDEHALELARRAVSRLNHQKEITLRLSPVKPPKFDISELYGIVGTDLKKP
FDVKEVIARIVDDSDFDEFKANYGATLVCGFARIHGYPVGIVANNGILFSESAQKGAHFI
ELCCQRKIPLLFLQNITGFMVGKKYEHEGIAKHGAKMVTAVSCANVPKFTVIIGGSYGAG
NYGMCGRAFEPTMMWMWPNARISVMGGEQAAGVLATVRRDGLARKGEEWSAEDEKAFKAP
IIAQYDKEGHPYHASARLWDDGIIDPAQTRDVVGLALSAALNAPIEDTRFGVFRM
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcaattaagcagtcgtatcaacgcccgtagcgatgaatttaaagccaaatccgac
gatatggccgccctagtggccgatctcaaaaccaaactcgccaaaatcgaactcggtggc
ggccctgtggcgctggaacgtcatttatcccgcggtaaacgcctgccccgtcaacgggtt
gagaaactcctcgacgcaggttcgccctttttagaattgtcgcaatttgcggcatttgaa
gtctatgacgaagaagtgcccgccgctggcatcattgcaggcattggccgcgtgagtggc
gtcgagtgcatgattattgctaacgatgccacggtcaaaggcggcacttactacccaatt
accgttaaaaaacacatccgcgcccaagagattgccagccgctgccatttgccctgtatc
tatttagtcgactccggcggcgctaacttgccccgtcaggacgaagtctttccagaccgc
gatcatttcggccggattttctacaaccaagcacaaatgtcggccaagggcattccgcaa
attgcagtggtgatgggtctgtgtaccgcaggcggcgcctatgtgcctgcgatggcggat
gaatctattatcgtaaaagatcaaggcactatcttcttagccggcccaccgttagtcaaa
gccgcaaccggggaagaagtcagcgccgaagaacttggcggcgccgacgtacacaccaaa
atttcgggcgtggccgatcacttagcccaaaacgatgagcatgccttagagcttgcgcgc
cgcgcggtatcacgccttaatcatcaaaaagaaatcacattacgcttaagtccggtaaaa
ccgccaaaattcgacattagcgaactctacggcattgtcggcaccgacttgaaaaagccc
tttgatgtcaaagaagttatcgctcgcatcgtcgacgactctgatttcgatgagtttaaa
gccaactatggcgcgaccttggtgtgtggttttgcccgcattcacggctatcccgtaggg
attgtggccaacaacggcattttattctcagaatcggcgcaaaaaggcgcacactttatc
gagctgtgctgccaacgtaagatcccactattgttcctgcaaaatatcaccggctttatg
gtgggtaaaaagtacgagcacgaaggcatcgctaagcacggcgccaagatggtgaccgca
gtctcctgcgccaatgtgcctaaattcactgtgattatcggtggcagctacggcgcgggt
aactacggtatgtgtggccgcgccttcgagccgaccatgatgtggatgtggcccaatgcg
cgcatatctgtaatgggtggcgagcaagccgctggcgtattagcgacagtgcgccgtgac
ggtttagcccgtaaaggcgaagaatggtctgctgaggatgaaaaagccttcaaggcaccg
attattgcccagtacgataaagagggtcatccctaccatgccagcgcccgcctgtgggat
gacggcattatcgacccagcgcaaacccgtgatgtggtaggccttgccctgtcagccgca
ttaaatgcccctatcgaagacacccgcttcggcgtcttccgtatgtaa
DBGET
integrated database retrieval system
