Shewanella oneidensis: SO_1928
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Entry
SO_1928 CDS
T00099
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit SdhA
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
son
Shewanella oneidensis
Pathway
son00020
Citrate cycle (TCA cycle)
son00190
Oxidative phosphorylation
son00650
Butanoate metabolism
son00720
Other carbon fixation pathways
son01100
Metabolic pathways
son01110
Biosynthesis of secondary metabolites
son01120
Microbial metabolism in diverse environments
son01200
Carbon metabolism
Module
son_M00009
Citrate cycle (TCA cycle, Krebs cycle)
son_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
son_M00149
Succinate dehydrogenase, prokaryotes
son_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SO_1928 (sdhA)
00650 Butanoate metabolism
SO_1928 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
SO_1928 (sdhA)
00720 Other carbon fixation pathways
SO_1928 (sdhA)
Enzymes [BR:
son01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SO_1928 (sdhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
GIDA
DAO
Pyr_redox_2
FAD_oxidored
FAD_binding_3
Thi4
Motif
Other DBs
NCBI-ProteinID:
AAN54979
UniProt:
Q8EFP2
LinkDB
All DBs
Position
2031618..2033384
Genome browser
AA seq
588 aa
AA seq
DB search
MSIPVREFDAVVIGAGGAGMRAALQISKEGKSCALLSKVFPTRSHTVSAQGGITVALGNA
HEDHWEQHMYDTVKGSDFIGDQDAIEFMCQTGPEAIIELEHMGLPFSRFDNGKIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHCLYQQNVKHKTQVFSEWYALDLVKNQDGAIVGC
TAIEIETGEIVYFKAKATVLATGGAGRIYASTTNAHINTGDGVGMAMRAGVQMQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLASRDVVARSMMTEIREG
RGLDGPLGPHCLLKLDHLGKETLEARLPGVCELSRTFAHIDPADGPIPVLPTCHYMMGGL
PTKVSGQVIRKNTDGTEQDVVGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGQHLG
KALDETADPKDATDADIQASLARLQRWESNKDGEDPVQIRKDLQLCMQLNFSVFRRGDAM
AEGLEQLKAIRKRLENAKLSDNSREFNTQRIECLELDNLMATAIATAYAANFRTESRGAH
SREDYLERDDENWLCHSLFDPVTETMDRRAVNMAPKLREAFPPKKRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgagtattccagtacgcgaatttgatgctgtagtgatcggcgccggtggtgcgggtatg
cgtgcagcactacagatttctaaagaaggtaagagctgtgcgcttttatctaaagttttc
ccaactcgttctcatactgtgtctgcgcagggtggtatcacagttgcgctgggtaacgcc
catgaagaccattgggaacaacacatgtacgataccgtaaaaggttccgacttcatcggt
gaccaagacgctatcgaatttatgtgtcaaaccggtccagaagccattattgaacttgag
cacatgggtttaccattctctcgtttcgataacggtaagatttaccaacgtcccttcggt
ggtcaatctaaaaactttggtggtgaacaagcggcacgtaccgcagcagcggccgaccgt
acaggtcacgcactgcttcactgcttataccaacagaacgtcaaacacaaaacacaagtg
ttttctgagtggtatgccctcgatttagtcaaaaaccaagacggtgccatcgtaggctgt
actgcgattgaaatcgagactggtgaaattgtttacttcaaagccaaagccactgtgtta
gcaacaggcggtgcaggtcgtatctacgcatcaaccacaaacgcacacattaatactggt
gacggtgtcggtatggcaatgcgtgctggcgttcagatgcaagatatggaaatgtggcaa
ttccacccaaccggtatcgctggtgctggtgtacttgtgactgaaggttgtcgtggtgaa
ggtggttacctactaaacaaagacggcgagcgtttcatggagcgttatgcaccaaacgcg
aaggatttggcatctcgtgacgtggttgcacgttctatgatgaccgaaatccgtgaaggt
cgtggtttagatggcccattaggcccacactgcttactgaaactcgatcacttaggtaaa
gagaccttagaagcccgtctaccaggcgtgtgtgaattatctcgtaccttcgctcacatc
gatccggccgatggtccaatcccagtattaccaacttgtcactatatgatgggtggtctg
ccgactaaggtgagtggtcaggttattcgtaagaatactgatggtactgagcaagacgta
gtcggtctgtttgctgttggtgagattgcctgtgtatctgtgcacggtgctaaccgctta
ggcggtaactcattgctcgacctagtggtctttggccgcgccgctggtcaacacttaggt
aaagcgctcgatgagactgcggatcctaaggatgccactgatgccgacatccaagcttct
ctggcacgtttacaacgctgggaaagcaataaagatggtgaagatccagtgcaaatccgt
aaggatttacaactttgcatgcaattaaacttctcagtattccgtcgtggcgatgcaatg
gctgaaggtttagagcagttaaaagccatccgtaagcgtttagaaaatgctaagttgtct
gataactctcgcgagtttaacacccaacgtatcgagtgtttagaattggacaacctgatg
gcgacggcgattgctaccgcttatgctgctaacttccgtacagagagccgcggtgctcac
tcacgtgaagattatttagagcgtgacgatgaaaactggttatgtcacagtctgtttgac
ccagtgacagaaaccatggaccgtcgtgctgtgaatatggcacctaagttgcgtgaagcc
ttcccgccgaagaaacgtacctactag
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