Shewanella oneidensis: SO_2215
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Entry
SO_2215 CDS
T00099
Name
(GenBank) ribosomal RNA small subunit methyltransferase RsmB family
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
son
Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
son03009
]
SO_2215
Enzymes [BR:
son01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
SO_2215
Ribosome biogenesis [BR:
son03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SO_2215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Ubie_methyltran
Methyltransf_31
FtsJ
Methyltransf_25
TRM5-TYW2_MTfase
GCD14
Methyltransf_4
Methyltr_RsmF_N
MTS
PrmA
Methyltransf_5
Methyltransf_15
NSUN5_fdxn-like
Motif
Other DBs
NCBI-ProteinID:
AAN55256
UniProt:
Q8EEZ4
LinkDB
All DBs
Position
2327975..2329189
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AA seq
404 aa
AA seq
DB search
MLNSPLSASSNELVINILAMVLSEGKPLDRAYSQHFSGLKLVPAEQARITTVTGDILRRL
NLYCFLADIKPEEMERLGSKLLNVWHLFHELELPKMQYSLPVDPDDLVARIEQAKTNPVL
WDGCPEWLDTMGREQLGASWEKERAALNRPPKRFLRVNGLKVSRDELVQKLATEFVSTQV
VDSVDSALEVTSDSALFRTNSFKEGLFEQQDAGSQRVAAALDAKPGMRVIDACAGAGGKT
LHIAAQMQGKGRLLAMDVEQWKLDNLKERARRNGAHNIETRLIVGSKTIKRLKLTADRVL
LDVPCSGLGVLKRNPDAKWRDTADRLPVLMELQKHILSSYSRMVKVGGIVVYATCSIFPC
ENRGQVDAFLAENPNFRLLEDETISPADTGFDGFYLAKLERIQE
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgttgaattctccgctttctgccagctcgaatgaattagtgatcaatatcttagctatg
gtgctaagcgaaggaaaacccttagacagggcttattctcagcatttttcaggattaaaa
ttggtccctgccgagcaggcgcggatcacgactgttaccggtgatattcttcgccgctta
aatctttactgtttcttagccgacatcaagccggaagaaatggagcgtttaggctcaaag
ttacttaatgtgtggcatttgtttcacgagcttgaattgcccaaaatgcagtattcgctg
ccggtggatcccgatgatttagtcgcacgtatcgaacaggctaaaactaaccccgtactt
tgggatggttgtcccgaatggttagataccatggggcgtgaacagttaggagcctcgtgg
gaaaaagagcgtgccgccttaaatcggccgcctaaacgttttctgcgggttaatggccta
aaagtcagtcgtgatgaattagtacaaaaattagcgactgaatttgtgtcgactcaagtg
gtagatagcgtagattccgcccttgaagtcacctcagattcggcattgtttcgcactaac
agctttaaagagggtttatttgagcagcaagatgcgggctcacaacgggtagcggctgcg
ctggatgctaaacctggcatgcgagtgatcgatgcctgcgctggtgctggcggtaaaacc
ttgcatattgccgcccaaatgcaaggcaaaggacgtttgctggcgatggatgttgagcaa
tggaaactcgacaatctgaaagagcgcgcccgccgtaatggtgcccataatatcgaaacg
cgtttaattgtgggttcaaaaaccattaaacgtttaaaactcacagctgatcgtgtgtta
ttggatgtgccttgttcgggtcttggagtgttaaagcgtaatcccgatgctaaatggcgt
gataccgcggatcgtttacctgtgttaatggaactgcaaaagcatattctcagtagttac
agccggatggtgaaggttggcggtatcgtggtctatgccacttgctccatttttccctgt
gaaaaccgtggtcaagtggatgccttcttagcagaaaacccaaatttccgcttactggag
gatgaaacgatcagccccgctgatactggttttgatggtttttatctcgcaaagcttgaa
cgtattcaagaataa
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