Shewanella oneidensis: SO_2217
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Entry
SO_2217 CDS
T00099
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase DdlA
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
son
Shewanella oneidensis
Pathway
son00470
D-Amino acid metabolism
son00550
Peptidoglycan biosynthesis
son01100
Metabolic pathways
son01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SO_2217 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SO_2217 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SO_2217 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
son01011
]
SO_2217 (ddlA)
Enzymes [BR:
son01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SO_2217 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
son01011
]
Precursor biosynthesis
Amino acid ligase
SO_2217 (ddlA)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
RimK
Motif
Other DBs
NCBI-ProteinID:
AAN55258
UniProt:
Q8EEZ2
LinkDB
All DBs
Position
complement(2331691..2332701)
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AA seq
336 aa
AA seq
DB search
MSKINLLLLCGGGSAEHDISLLSANYFETSLAKSEQFNVLRVVLDKFGQYQTAAGDDCEL
TNNREIRFRDESKAPWPVDYVIPCIHGYPGETGDIQSYFNLIQLPYFGCESEASSNCFNK
ITAKMWFSALGIPNTPYIFLNQYDDEAIAQTQAALEKWGSIFVKAASQGSSVGCYKVDEA
SKVLGVLKDAFGYAPYVIVEKTIKARELEVAVYEYQGEVIATLPGEIICDSNTFYTFDEK
YAKSSKARTDVVAQNVPTDISDQIRAYAIKAFKGMKLRHLSRIDFFLTADNEILLNEINT
FPGSTPISMFPKMLQNHGHDFTQYLSLVINSQLAAK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaatcaatttacttttgctgtgcggcggtggaagtgcggaacacgatatttcc
ctactgtcggctaattattttgaaacctcattagcaaaatcagaacagttcaatgtacta
cgtgtggtactggataaatttggccaataccaaaccgccgcaggggatgactgcgagctg
accaataaccgtgagatccgctttcgtgacgagagtaaagccccttggcctgtggattat
gtcatcccttgtattcacggttatccgggcgaaactggtgatattcaatcttactttaat
cttatccaactgccctactttggctgtgagtccgaagccagcagcaactgctttaacaaa
atcactgctaagatgtggttcagcgccttaggcattcccaacacgccttatatcttttta
aatcaatacgatgatgaagccattgcccaaacccaagcggcacttgaaaagtggggatcg
attttcgtcaaagcggcctctcaaggctcctctgtcggttgctataaggtggatgaggcc
agcaaagtgctaggcgtgcttaaagacgcatttggttatgcgccctacgtaattgtcgaa
aaaaccattaaagcccgtgaacttgaagtcgcggtttacgaatatcaaggtgaagtgatt
gccactctacccggcgaaattatctgtgatagcaataccttctacaccttcgatgagaaa
tacgcgaaaagcagcaaggcacgcaccgatgtggttgcgcaaaatgtgccgactgacatt
agcgatcagatccgcgcctatgcgattaaagcctttaagggaatgaaattacgccatctg
tcccgtattgattttttcttaacggcggataatgaaatcctgttaaacgaaatcaatacc
ttcccaggttcaacaccgatttccatgttcccaaagatgctacaaaatcatggacatgac
ttcacccaatacttaagtttggtgattaacagccagttagcggcaaagtaa
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