Shewanella oneidensis: SO_2245
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Entry
SO_2245 CDS
T00099
Name
(GenBank) exonuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
son
Shewanella oneidensis
Pathway
son03030
DNA replication
son03430
Mismatch repair
son03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
son00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SO_2245
03430 Mismatch repair
SO_2245
03440 Homologous recombination
SO_2245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
son03032
]
SO_2245
03400 DNA repair and recombination proteins [BR:
son03400
]
SO_2245
Enzymes [BR:
son01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SO_2245
DNA replication proteins [BR:
son03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SO_2245
DNA repair and recombination proteins [BR:
son03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SO_2245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AAN55285
UniProt:
Q8EEW7
LinkDB
All DBs
Position
complement(2360597..2361235)
Genome browser
AA seq
212 aa
AA seq
DB search
MPKTPVYTPANTLVVLDFETSGLSPNQGARAIEIGAVLIEQGQITTRFSELMNPGFRINA
FIEDYTGISNQMLAHAAPCAEVMARFAEFIGKHHLVAHNAAFDQRFLDAEFAHIGHQYSG
QFGCSLLLARRLYPEAINHQLATLVRHKQLPNNGTFHRALADAEMTGHLWLRMLADLKQD
FAIVEPPFSLMQKVMSKSKAEVPKFLRQYARA
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaacacccgtctacacacccgccaatacccttgtggtgctcgattttgaaacc
tcgggactctcaccaaaccagggtgcccgtgccattgagattggcgcggtattaattgag
caaggccagattactacgcgtttttcagaattaatgaatcccggttttcggataaacgcc
tttattgaagattacaccgggatcagcaatcaaatgctcgcccacgcggcgccctgtgcg
gaggtaatggcacgctttgcagaatttatcggcaagcatcatctggttgcccataacgcc
gccttcgatcagcggtttcttgatgccgaatttgctcatatcggtcaccaatattcaggt
caatttggttgttcattactgctggcaagacgtttataccctgaagccatcaatcatcag
ttggcaacattagtacgccataagcagctaccgaacaatggcactttccaccgtgcgctt
gcggacgcggaaatgacgggacatttatggctacgaatgctggcggatctgaaacaggat
tttgcgattgtagaaccgccctttagcctaatgcaaaaagtgatgagcaagagtaaagcc
gaagtacctaagtttctccgtcagtacgcaagggcttaa
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