Shewanella oneidensis: SO_2310
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Entry
SO_2310 CDS
T00099
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase SerS
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
son
Shewanella oneidensis
Pathway
son00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SO_2310 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
son01007
]
SO_2310 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
son03016
]
SO_2310 (serS)
Enzymes [BR:
son01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
SO_2310 (serS)
Amino acid related enzymes [BR:
son01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SO_2310 (serS)
Transfer RNA biogenesis [BR:
son03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SO_2310 (serS)
Prokaryotic type
SO_2310 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
RNase_Y_N
ERM_helical
Motif
Other DBs
NCBI-ProteinID:
AAN55349
UniProt:
Q8EEQ9
LinkDB
All DBs
Position
2422248..2423534
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AA seq
428 aa
AA seq
DB search
MLDPKFLRNELAVTAERLATRGFILDVAHLTQLEEKRKSLQVATEELQASRNAISKSIGQ
AKARGEDVDAIMAQVGDLGAQLDAKKVELAAVLEEVNAIAMSMPNLPDESAPIGADETEN
VEVRRWGSPRSFDFPIKDHIDLGEGLNGLDFKSAVKITGSRFIVMKGQIARLNRALGQFM
LDLHTTEHGYTEAYVPLLVNEASLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPL
TNLVRDSIVDEDELPIKLTAHTACFRSEAGSYGKDTRGLIRQHQFDKVELVQLVKPEDSM
AALEVLTGHAETVLQRLGLPYRTVVLCTGDMGFGSSKTYDIEVWLPGQNTYREISSCSNM
KDFQARRMQARYRVKADNKPVLLHTLNGSGLAVGRTLVAILENYQNADGSVTVPEALRPY
MGGLTQIG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgttagatcctaaatttttgcgcaacgaattagccgtgaccgctgagcgattagctacc
cgtggttttattttagatgtcgctcatctcactcaattagaagaaaaacgtaagtcactg
caagtggcgacagaagagctgcaagcttcgcgtaatgctatttccaagtccattggacaa
gctaaagcacgtggtgaagatgttgatgccataatggcgcaggtcggtgatttaggggcg
caactcgatgcgaaaaaagtcgagcttgccgcagtacttgaagaagttaacgcgattgcc
atgtcgatgccaaacctgccggatgagtctgcgccaatcggggccgatgaaactgaaaac
gttgaagtccgccgttggggttcgccacgcagttttgattttccaattaaagatcatatc
gatttaggcgaaggcctaaacggcttagattttaaaagcgcggttaaaatcacgggatct
cgttttatcgtaatgaaaggccaaattgctcgtttaaaccgcgcattaggtcagttcatg
ttagatctgcacaccaccgaacatggttatactgaagcctatgtgccattactcgttaat
gaggctagcttattgggcacaggtcaattacccaagtttggtgaagatttgttccacacc
aaacctgcgaccgaagaaggccaaggcttaagccttattccaaccgcagaagtgccatta
actaacttagtacgtgatagcatcgttgatgaagatgagttaccgattaagttaactgcg
catacggcgtgtttccgcagcgaagcgggctcatatggtaaagatacccgtggtcttatc
cgtcagcaccaatttgataaagtggaattagtacagttggttaagccagaagattcaatg
gctgcactcgaagtgttgacgggtcatgctgaaacagtactgcaacgcttaggtttacct
tatcgcaccgtcgtgctttgcactggtgacatgggctttggctcaagcaagacctacgat
attgaagtgtggttacctggtcaaaacacttaccgtgagatctcttcatgctcaaatatg
aaggatttccaagcgcgtcgtatgcaagcgcgctaccgagtgaaggccgataacaagcct
gtgttgcttcacaccttaaatggctcaggcctcgcggtgggacgtactttagtggcaatt
ttagaaaactatcaaaatgccgatggtagcgtgactgttcctgaggcgctacgtccttat
atgggcggattaactcagatcggttaa
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