Shewanella oneidensis: SO_2347
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Entry
SO_2347 CDS
T00099
Symbol
gapB
Name
(GenBank) glyceraldehyde-3-phosphate dehydrogenase GapB
KO
K00134
glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:
1.2.1.12
]
Organism
son
Shewanella oneidensis
Pathway
son00010
Glycolysis / Gluconeogenesis
son00710
Carbon fixation by Calvin cycle
son01100
Metabolic pathways
son01110
Biosynthesis of secondary metabolites
son01120
Microbial metabolism in diverse environments
son01200
Carbon metabolism
son01230
Biosynthesis of amino acids
Module
son_M00002
Glycolysis, core module involving three-carbon compounds
son_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SO_2347 (gapB)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
SO_2347 (gapB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
son04131
]
SO_2347 (gapB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
son04147
]
SO_2347 (gapB)
Enzymes [BR:
son01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.12 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)
SO_2347 (gapB)
Membrane trafficking [BR:
son04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
SO_2347 (gapB)
Exosome [BR:
son04147
]
Exosomal proteins
Proteins found in most exosomes
SO_2347 (gapB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gp_dh_C
Gp_dh_N
Motif
Other DBs
NCBI-ProteinID:
AAN55381
UniProt:
Q8EEN1
LinkDB
All DBs
Position
2455117..2456550
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AA seq
477 aa
AA seq
DB search
MSADKHLQSWQERFEMAEAMQPLLGKLYRNQGVEVVVYGKPLLNASTIEIIKAHRLVRRH
VGEKLRLRESFPFVQALSRLAVKQCKVDIGKLAVKYWAEHTDTNEIESYMARELAAAIDH
ADDIAPRDVVLYGFGRIGRLLARLLIERTGRSNKLRLRAIVLRGGKKGDLEKRASLLRRD
SVHGPFNGSVEVDEENNAIIANGTYIQVIYANSPDEVDYTKYGINDALVVDNTGIWKDEA
GLGLHLKSPGASKVLLTAPAKGAIKNIVYGVNEGDITPEDIIVSAASCTTNAITPVLKAV
NDKYGIENGHVETIHSYTNDQNLIDNYHSADRRGRSAPLNMVITETGAAKAVAKALPVLA
GKLTGNAIRVPTPNVSMAIISMNLNAETNKDELNEYLKDTALQSPLQNQIDYTDSTEIVS
SDLVGSRYAGVVDSQATIAEGKRAILYVWYDNEFGYSCQVVGVMQTMLGLTTLSLPA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgataaacacctacaaagttggcaagaacgttttgaaatggcagaggcaatg
caacctttgctgggcaagttataccgtaaccaaggcgtcgaagttgtggtttatggtaag
ccgttactcaatgcttctactattgagattattaaagcgcaccgtttagttcgtcgtcat
gttggcgagaaattacgtttacgcgagagtttcccgtttgttcaagccttaagcagactc
gctgttaaacaatgtaaagtggatattggtaagcttgccgttaaatactgggctgaacat
accgataccaatgaaattgaaagctatatggcacgtgaattagccgctgcgattgatcat
gccgatgatatcgctccgcgtgatgtggtgttgtatggttttggtcgtattggccgtcta
ttagcgcgcttacttattgagcgtactggtcgcagcaacaagttaagattacgtgccatc
gtattgcgtggcggtaagaagggcgatttagaaaaacgtgccagtctacttcgccgtgat
tcagtacacggtccattcaacggctctgttgaagtagatgaagagaataatgccatcatc
gctaacggtacttatatccaagtcatttacgcaaactcgccagatgaagtggattacacc
aaatacggcattaacgatgcacttgttgttgataacacaggtatttggaaagatgaagca
ggcttaggcttacacttaaagagccccggtgcaagcaaagtgttactgaccgcgcctgct
aaaggcgccatcaagaacatcgtttacggtgtgaacgaaggcgacattacgccagaagac
atcatcgtgtcagcagcaagctgtaccactaacgcgattacgccagtgttgaaagcggta
aacgataagtacggtatcgagaatggtcatgttgagactatccactcatacactaacgat
caaaacctgatcgacaactaccatagtgctgaccgtcgtggacgcagtgcaccattaaac
atggtgatcacagaaactggcgcagccaaagcggttgctaaggcgctgcctgtattagcc
ggaaagttaacaggtaacgcgattcgcgtgccaacaccaaacgtgtctatggcaatcatc
agcatgaacttaaatgctgaaaccaacaaagacgaattaaacgaatacctgaaagatacg
gcgctgcaatcacccttgcaaaaccaaatcgactatacggactcgactgaaatcgtatcg
agcgatttagtgggttctcgctatgcgggtgttgttgactctcaagcgacaatcgctgaa
ggtaaacgcgccattctatacgtatggtatgacaacgaatttggttacagctgccaagtg
gtcggtgtcatgcaaacgatgttaggattaacgacattgtcgctgcccgcttaa
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