Shewanella oneidensis: SO_2354
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Entry
SO_2354 CDS
T00099
Symbol
ydaO
Name
(GenBank) tRNA(Cytosine32)-2-thiocytidine synthetaseYdaO
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
son
Shewanella oneidensis
Brite
KEGG Orthology (KO) [BR:
son00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
son03016
]
SO_2354 (ydaO)
Transfer RNA biogenesis [BR:
son03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
SO_2354 (ydaO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
AAN55388
UniProt:
Q8EEM4
LinkDB
All DBs
Position
complement(2461419..2462351)
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AA seq
310 aa
AA seq
DB search
MPEELSKKQTTRLNKLQKRLRREVGSAIADYNMIEDGDRVMCCLSGGKDSYAMLDILLNL
QQRAPVQFEIIAVNLDQKQPGFPEDVLPAYLDSLNVPYHILEKDTYSIVKEKIPEGKTTC
SLCSRLRRGTLYGFAQRIGATKIALGHHRDDIIETLFLNMFFGGKMKAMPPKLLSDDGAN
VVIRPLAYCREKDLEEYAELKKFPIIPCNLCGSQENLKRQAVKDMLNQWNRQFPGRIETI
FTAMQNTAPSQGVDREQFDFVSLKRDPDAPMKGDVAEANLPAFDFLDIANSGHIDLDAAK
RIDIVNVYEV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaattatcaaaaaaacaaactacccgtctgaataaattacaaaagcgtcta
cgccgtgaagtaggtagtgccatcgccgactacaacatgattgaagatggcgatcgtgtt
atgtgctgtttgagtggcggtaaagacagctatgccatgctcgatattctgcttaatctg
cagcaacgcgcacctgtgcagttcgaaatcatcgctgttaacttagatcaaaagcagccc
ggtttcccagaagatgttctaccagcctatttagacagcctaaatgttccctatcacatc
ctcgagaaagacacctactcgatcgtgaaggagaaaattccggaaggcaaaaccacctgc
tctctatgctctcgtctacgccgcggcaccctctatggctttgcgcagcgcattggcgcg
actaaaatcgcccttggtcatcacagagacgatattattgagacgctttttcttaatatg
tttttcggcggcaagatgaaagccatgccacctaagctactctctgacgacggcgctaac
gtggtgatccgcccactcgcctactgccgcgaaaaagatttggaagagtatgcagagctt
aaaaaattccccattattccctgtaacctctgtggctctcaggaaaaccttaagcgccaa
gcggtgaaagacatgctcaatcaatggaacagacaatttcctggacgtattgaaaccatc
ttcaccgccatgcaaaacactgcgccatcgcagggtgttgaccgtgagcagtttgatttt
gtatcgttaaaacgcgatcctgacgcccccatgaaaggcgatgttgctgaagccaatctt
cccgcgttcgattttctcgatattgccaacagcggtcatatcgatttagatgccgcaaaa
cggattgatattgttaacgtttatgaagtgtaa
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